Gene Bcen_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2172 
Symbol 
ID4092104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2399470 
End bp2400453 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID638015452 
ProductKpsF/GutQ family protein 
Protein accessionYP_622046 
Protein GI107023719 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCGA AAATCAATGA TGATCGGGCG CTCGCGCTCG CCCGCGACGT GCTCGACATC 
GAGGCGGACG CCGTGCGCGC GCTGAGCGAC CAGCTCGACG GCGGCTTCGT CCAGGCCGTG
GCGCTGCTGC TCGGCTGCCG CGGCCGCGTC GTGGTCTCCG GGATCGGCAA ATCGGGGCAT
ATCGCCCGCA AGATCGCAGC CACGCTGGCC AGCACCGGTA CGCCGGCCTT CTTCGTCCAC
CCTGCCGAGG CCAGCCACGG CGACCTCGGG ATGGTCACCT CCGACGACGT CTTCATCGGC
ATCTCCTATT CCGGCGAATC GGAAGAACTC GTCGCGATCC TGCCGCTCGT GAAGCGGATC
GGCGCGAAGC TGATCGCGAT CACGGGCCGC GCGGGGTCGA GCCTCGGCAC GCTCGCCGAC
GTGAACCTGA ACGCCGCGGT GTCGAAGGAA GCGTGCCCGC TGAACCTCGC GCCCACCGCG
AGCACGACTG CCGCGCTCGC GCTCGGCGAC GCGCTCGCCG TCGCCGTGCT CGACGCGCGC
GGCTTCGGCT CGGAGGATTT CGCGCGCTCG CATCCGGGCG GCGCGCTCGG CCGGCGCCTG
CTCACCTACG TGCGCGACGT GATGCGCTCG GGCGACGACG TCCCGTCCGT CGGGCTGAAT
GCGACGCTGT CGGACGCGCT GTTCCAGATC ACCGCGAAGC GCCTCGGCAT GACGGCCGTG
GTCGACGCCG ACGGCAAGGT CGCCGGCATC TTCACCGACG GCGACCTGCG CCGCGTGCTC
GCGCGCGACG GCGATTTCCG CACGCTGCCG ATCACCGAAG TCATGACGCG CGACCCGCGC
ACGATCGCGC CGGACCACCT GGCGGTCGAG GCCGTGGAAC TGATGGAGCG CCACCGGATC
AACCAGATGC TGGTCGTCGA TGCCGACGGC GCGCTGATCG GCGCGCTGAA CATGCACGAC
CTGTTTTCGA AGAAGGTGAT CTGA
 
Protein sequence
MIAKINDDRA LALARDVLDI EADAVRALSD QLDGGFVQAV ALLLGCRGRV VVSGIGKSGH 
IARKIAATLA STGTPAFFVH PAEASHGDLG MVTSDDVFIG ISYSGESEEL VAILPLVKRI
GAKLIAITGR AGSSLGTLAD VNLNAAVSKE ACPLNLAPTA STTAALALGD ALAVAVLDAR
GFGSEDFARS HPGGALGRRL LTYVRDVMRS GDDVPSVGLN ATLSDALFQI TAKRLGMTAV
VDADGKVAGI FTDGDLRRVL ARDGDFRTLP ITEVMTRDPR TIAPDHLAVE AVELMERHRI
NQMLVVDADG ALIGALNMHD LFSKKVI