| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2102 |
|---|
| Symbol | |
|---|
| ID | 4091112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2322274 |
|---|
| End bp | 2324145 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638015382 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_621976 |
|---|
| Protein GI | 107023649 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.314001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAT TTCCCGCTTC CGGCGAGCCC GCGCCGGCTT CGACCGGGCC TCGCAACGAC
TGGCAGACCA TCCGGTCGCT GCTGCCGTAC CTGACCACCT ACAAATGGCG CGTCGCGCTC
GCGCTCGGCT GCCTGATCGG TGCGAAGGTC GCGAACCTCG GCGTGCCGGT CGTGATGAAG
CGCATCGTCG ACCATCTGTC CTACGTGCAG CAGCTCACCG CGCTCGGCCG TGCCGAACAG
TCGGCCGGCA TCGTGCTCGC GGGCGGCGTC GGGCTGCTGG TGGTCGCGTA TGCGCTCGTG
CGGCTGTCGA CGTCGCTCTT TACCGAGCTG CGCGAGATCC TGTTCTCGAA GGTCACCGAG
AGCGCGGTGC GCCAGCTCGC GCTGCAGGTG TTCCGGCATC TGCACGGGCT GTCGCTGCGG
TTTCATCTCG AGCGCCAGAC GGGCGGCATG TCGCGCGACA TCGAGCGCGG CACGCGCGGC
ATCCAGCAAC TGATTTCGTA TTCGCTGTAC AGCATCCTGC CGACGCTCGT CGAGGTCGGG
CTCGTGCTCG GCTTCTTCGT GGTCAAGTAC GAGGCTTACT ACGCGTACGT GACGTTCGCC
GCGCTGGTCA CGTACATCGT GTTCACCGTG AAGGTCACCA ACTGGCGCAC GCACTTCCGC
CGCACGATGA ACGAGCTCGA TTCGCGCGCG AACTCGCGGG CCATCGATTC GCTGATCAAC
TACGAGACGG TGAAGTACTT CGGCAACGAG GAGTGGGAGG CGCAGCGCTA CGACGAGAAC
CTGAAGCGCT ACCGGAAGGC CGCGATCCGC TCGCAGAACT CGCTGTCGGT GCTGAACTTC
GGTCAGCAGG CGATCATCGG CACGGGCCTC GTGTTCATCC TGTGGCGGGC GACGCAGGGC
GTGCTCGCGG GCAAGCTGAC GCTCGGCGAT CTCGTGCTGA TCAACACGTT CATGCTGCAG
CTGTACATTC CGCTGAACTT TCTCGGCGTC GTCTATCGCG AGCTGAAGCA GAGCCTGACC
GACATGGACC GGATGTTCGG GCTGCTGTCC GCGCCGAAGG AAGTGGCCGA CCGGCCCGAT
GCGCGGCCGC TCGCGGTGGC CGGCGCGCAG GTGCGCTTCG AGCACGTGAA CTTCGCGTAC
GAGCCGTCGC GGCAGATCCT GCACGACGTG ACGTTTACGA TCGAGGCCGG CACGACGACG
GCGGTGGTCG GCCACAGCGG TTCGGGGAAA TCGACGCTGT CGCGGTTGCT GTTCCGCTTC
TACGATCTCG ACCGCGAGAC GGGCGGTGCG ATCCGGATAG ACGGTCAGGA CATCCGCGAC
GTCACGCAGG AATCGCTGCG CGCATCGATC GGGATCGTGC CGCAGGACAC CGTGCTGTTC
AACGACTCGA TCTACTACAA CATCGCGTAC GGCCGGCCGA CGGCGACCCG CGACGAGGTG
GTCGCGGCCG CGCGCGCCGC GCACATCCAC GATTTCATCG AAACTTTGCC GAAGGGCTAT
GACACGCCGG TGGGCGAGCG CGGGCTGAAG CTGTCGGGCG GCGAGAAGCA GCGCGTCGCG
ATCGCGCGCA CGCTATTGAA GGACCCACCG GTGCTGCTGT TCGACGAAGC GACGTCGGCG
CTCGATTCTC GCTCGGAACG CGCGATCCAG CACGAACTCG ACCAGATCGC GCGGCATCGC
ACGACGCTCG TGATCGCGCA CCGGCTGTCG ACGGTCGTGC ACGCGCAGCA GATCCTCGTG
ATGGACCACG GGCGGATCGT CGAACGCGGC ACGCACGACG AACTCGTGCG CGCCGACGGG
CTGTATGCGC AGATGTGGGC GCTGCAACAG CAGCGCGCGG CGGCGGGTGG GGAAGAGGCC
GAGGCCGCGT AA
|
|---|
| Protein sequence | MRRFPASGEP APASTGPRND WQTIRSLLPY LTTYKWRVAL ALGCLIGAKV ANLGVPVVMK
RIVDHLSYVQ QLTALGRAEQ SAGIVLAGGV GLLVVAYALV RLSTSLFTEL REILFSKVTE
SAVRQLALQV FRHLHGLSLR FHLERQTGGM SRDIERGTRG IQQLISYSLY SILPTLVEVG
LVLGFFVVKY EAYYAYVTFA ALVTYIVFTV KVTNWRTHFR RTMNELDSRA NSRAIDSLIN
YETVKYFGNE EWEAQRYDEN LKRYRKAAIR SQNSLSVLNF GQQAIIGTGL VFILWRATQG
VLAGKLTLGD LVLINTFMLQ LYIPLNFLGV VYRELKQSLT DMDRMFGLLS APKEVADRPD
ARPLAVAGAQ VRFEHVNFAY EPSRQILHDV TFTIEAGTTT AVVGHSGSGK STLSRLLFRF
YDLDRETGGA IRIDGQDIRD VTQESLRASI GIVPQDTVLF NDSIYYNIAY GRPTATRDEV
VAAARAAHIH DFIETLPKGY DTPVGERGLK LSGGEKQRVA IARTLLKDPP VLLFDEATSA
LDSRSERAIQ HELDQIARHR TTLVIAHRLS TVVHAQQILV MDHGRIVERG THDELVRADG
LYAQMWALQQ QRAAAGGEEA EAA
|
|---|
| |