Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2090 |
Symbol | glyS |
ID | 4091255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2308115 |
End bp | 2310214 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015370 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_621964 |
Protein GI | 107023637 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCACA ATCATCCCGC CCCCCTGCTC GTCGAACTGC TGACCGAAGA GCTGCCGCCG AAGGCCCTCG CGCGCCTCGG CGACGCATTC GCCGAAGGCA TCGCGCAACG CCTCGCGGCG CGCGACCTCA TCGAAGGCGA ACTCGTGTTC GAGCGCTACG CCACGCCGCG CCGCCTCGCG GTCGTCGTGC AGAACGTGCG CGCCGTCGCG CCTGACAAAC AGGTCCGCGA AAAGGTCCTG CCCGTGTCGG TCGCGCTCGA CGCCGAAGGC AAGCCGACGG CCCCGCTCGC GAAGAAGCTC GCGGCGCTCG GCCACCCGAA TGCGTCGATC GCCGATCTCG AACGCGCGCA GGACGGCAAG GCCGAAGCGT TCTTCATCAA CTACTCGGCG GCCGGCGCCA CGCTCGCCGA CGGCCTGCAG GCCGCGCTCG ACGAAGCGCT CGCGAAGCTG CCGATCCCGA AATTCATGAC GTACCAGCGC CCGGACGGCT CGGACGTGAA GTTCGTGCGC CCGGTGCATC GCCTGACGGT GCTGCACGAC GACCGCGTCG TGCCCGTCAC CGCGTTCGGC GTCGATGCCG GCGACACGAC GCTCGGCCAC CGCTTCCTGT CCGACGGCCT GGTCGCGATC CAGCATGCCC GCGCGTATGC CGACACGCTG CGCGACAAGG GCCGCGTGAT CGCGCACTTC GCCGATCGCC GCGAAACGAT CCGCACGCAG CTGAACGAAC ATGCGAACGG CGACACGGTC GTGATGCCCG AGTCGCTGCT CGACGAAGTC ACGTCGCTGG TCGAATGGCC GGTCGTCTAC CCGTGCCGCT TCGAGGACGA ATTCCTGCAG GTGCCGCAGG AATGCCTGAT CCTCACGATG CAGACGAACC AGAAGTATTT CGCGCTGACC GACGTCGCCG GCAAGCTGCG CTCGCGCTTC CTGATCGTGT CGAACATCGA GACGAAAACG CCGGGCGAGA TCATCGAAGG CAACGAGCGC GTCGTGCGCC CGCGCCTCGC CGATGCAAAG TTCTTCTTCG AGCAGGACAA GAAGAAGCCG CTCGCCGACC GCGTGCCGCA GCTCGCGAAC GTCGTCTATC ACAACAAGCT GGGTTCGGCG CTCGCCCGCG TCGAGCGCCT CGAGGCGCTG GCCGGCGAGA TCGCCCCGGC GATCGGCGCC GACACCGCGC ACGCGAAGCG CGCCGCGCGC CTCGCGAAGG CCGATCTGCT GACCGACATG GTCGGCGAAT TCCCGGAACT GCAGGGCACG ATGGGCACGT ACTACGCGCG CCACGACGGC GAAGCCGACG ACGTCGCGCT CGCATGCGCC GAGCACTACC AGCCGCGCTT CTCCGGCGAC GCACTGCCGA CCACGCCGGT GTCGACCGCC GTCGCGCTCG CGGACAAGCT CGAAACGATC GTCGGCATCT GGGGCATCGG CCTCGCGCCG ACCGGCGAGA AGGACCCGTT CGCGCTGCGC CGTCACGCGC TCGGCGTGCT GCGCCTGCTG CTCGAAAAGC AGTTGCCGCT CGATCTCGTG TCGCTGTTGC ACACGGCCCA CGCACGCTTT GCCGGCGTGC CGGGCGTCGC CGAGTCGACG GACGCCATCT TCGCGTTCTT CATGGATCGC CTGCGCGGCC TGCTGCGCGA GCGCGGCTAT TCGGCCGGTG AAATCGACGC GGTGCTGAGC CTGAACCCGA CGCGCATCGA CGATCTCGTC GCGCGCCTCG ACGCGGTACG CGAATTCACG CGCCTCGCGG AAGCCGAAGC ACTCGCGGCC GCGAACAAGC GGATCTCGAA CATCCTGAAG AAGTCGGAAG GCGGCGCGAA CGGCGCGGTG CAGCCGACGC TGCTCGTCGA GGCCGCCGAG AAGGCGCTGC ACGAACAGCT CGCGGCCGTC ACGCCGCACG TGCAGTCGCA GCTCGAGGCG CGTGCGTACA CGGGCGCGCT GTCGGCGCTC GCCGCGCTGC GCGTGCCGGT CGACACGTTC TTCAACGACG TGATGGTCAA CGCGGGAGAT CCGGCCCTGC GCGCGAACCG TCTCGCGCTG CTGTCCGCGC TGCACCAGCA GATGAACTGC GTCGCCGACA TCTCGAAGCT CGCCGCATAA
|
Protein sequence | MTHNHPAPLL VELLTEELPP KALARLGDAF AEGIAQRLAA RDLIEGELVF ERYATPRRLA VVVQNVRAVA PDKQVREKVL PVSVALDAEG KPTAPLAKKL AALGHPNASI ADLERAQDGK AEAFFINYSA AGATLADGLQ AALDEALAKL PIPKFMTYQR PDGSDVKFVR PVHRLTVLHD DRVVPVTAFG VDAGDTTLGH RFLSDGLVAI QHARAYADTL RDKGRVIAHF ADRRETIRTQ LNEHANGDTV VMPESLLDEV TSLVEWPVVY PCRFEDEFLQ VPQECLILTM QTNQKYFALT DVAGKLRSRF LIVSNIETKT PGEIIEGNER VVRPRLADAK FFFEQDKKKP LADRVPQLAN VVYHNKLGSA LARVERLEAL AGEIAPAIGA DTAHAKRAAR LAKADLLTDM VGEFPELQGT MGTYYARHDG EADDVALACA EHYQPRFSGD ALPTTPVSTA VALADKLETI VGIWGIGLAP TGEKDPFALR RHALGVLRLL LEKQLPLDLV SLLHTAHARF AGVPGVAEST DAIFAFFMDR LRGLLRERGY SAGEIDAVLS LNPTRIDDLV ARLDAVREFT RLAEAEALAA ANKRISNILK KSEGGANGAV QPTLLVEAAE KALHEQLAAV TPHVQSQLEA RAYTGALSAL AALRVPVDTF FNDVMVNAGD PALRANRLAL LSALHQQMNC VADISKLAA
|
| |