Gene Bcen_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1990 
Symbol 
ID4091152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2193814 
End bp2194725 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID638015269 
Productperiplasmic solute binding protein 
Protein accessionYP_621864 
Protein GI107023537 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.738154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTG CCCTGAAGCG CGCGCCGCGG CGCGCCCTGT CGCCTGTCCG CTGGCTGGCC 
GCCGCCGTCG CCGCGCTGTC GTTCGCCGCG CCCGTGGTCG CGCAGGCCGC GACCGTCAAC
GTCGTCGCCG CGGAGAATTT CTACGGCGAC GTCGCGTCGC AGATAGGCGG CCGCCACGTC
GCGGTCACCA GCATCCTCAG CAATCCGGAT CAGGACCCGC ACCTGTTCGA AGCGAGCCCG
AAGACGGCCC GCGCGCTCCA GCACGCGCAG GTCGTGATCT ACAACGGCGC CGACTACGAT
CCGTGGATGG GCAAGTTGCT CGGCGCGTCG AAACAGGCGA AGCGCGCGAC GATCGTCGTC
GCCGATCTCG TCGGCAAGAA GGCCGGCGAC AACCCGCACC TGTGGTACGA CCCGGCGACG
ATGCCGGCGG CCGCACGCGC GATCGCGGCC GAGCTGGGCC GCGCCGACCC GGCGAACAAG
GCCGAATACG AGGCGAACCT GCAGAAGTTC GTCGCGTCGC TGAAGCCCGT CGACGACAAG
ATCGCCGCGC TGCGCGCGAA ATACAAGGGC GTGCCCGTGA CGGCCACCGA GCCCGTGTTC
GGCTATATGT CGGACGCGAT CGGCCTCGAC ATGCGCAACC AGCGCTTCCA GCTCGCGACG
ATGAACGACA CCGAAGCCAG CGCGCAGGAC GTCGCCGCGT TCGAGGGCGA CCTGCGCAAG
AAGCAGGTGC GCGTGCTGAT CTACAACAGC CAGGCCGAGG AGCCGATGAC CAAGCGCATG
CTGAAGATCG CGCGCGACGG CGGCGTGCCG ACCGTCAGCG TCACCGAGAC GCAGCCGGCC
GGCAAGACCT TCCAGCAATG GATGGGCGGC CAGCTCGACG CGCTCGGCAA CGCGCTTTCC
GCCGGCAAGT AA
 
Protein sequence
MSIALKRAPR RALSPVRWLA AAVAALSFAA PVVAQAATVN VVAAENFYGD VASQIGGRHV 
AVTSILSNPD QDPHLFEASP KTARALQHAQ VVIYNGADYD PWMGKLLGAS KQAKRATIVV
ADLVGKKAGD NPHLWYDPAT MPAAARAIAA ELGRADPANK AEYEANLQKF VASLKPVDDK
IAALRAKYKG VPVTATEPVF GYMSDAIGLD MRNQRFQLAT MNDTEASAQD VAAFEGDLRK
KQVRVLIYNS QAEEPMTKRM LKIARDGGVP TVSVTETQPA GKTFQQWMGG QLDALGNALS
AGK