Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1990 |
Symbol | |
ID | 4091152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2193814 |
End bp | 2194725 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015269 |
Product | periplasmic solute binding protein |
Protein accession | YP_621864 |
Protein GI | 107023537 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.738154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTG CCCTGAAGCG CGCGCCGCGG CGCGCCCTGT CGCCTGTCCG CTGGCTGGCC GCCGCCGTCG CCGCGCTGTC GTTCGCCGCG CCCGTGGTCG CGCAGGCCGC GACCGTCAAC GTCGTCGCCG CGGAGAATTT CTACGGCGAC GTCGCGTCGC AGATAGGCGG CCGCCACGTC GCGGTCACCA GCATCCTCAG CAATCCGGAT CAGGACCCGC ACCTGTTCGA AGCGAGCCCG AAGACGGCCC GCGCGCTCCA GCACGCGCAG GTCGTGATCT ACAACGGCGC CGACTACGAT CCGTGGATGG GCAAGTTGCT CGGCGCGTCG AAACAGGCGA AGCGCGCGAC GATCGTCGTC GCCGATCTCG TCGGCAAGAA GGCCGGCGAC AACCCGCACC TGTGGTACGA CCCGGCGACG ATGCCGGCGG CCGCACGCGC GATCGCGGCC GAGCTGGGCC GCGCCGACCC GGCGAACAAG GCCGAATACG AGGCGAACCT GCAGAAGTTC GTCGCGTCGC TGAAGCCCGT CGACGACAAG ATCGCCGCGC TGCGCGCGAA ATACAAGGGC GTGCCCGTGA CGGCCACCGA GCCCGTGTTC GGCTATATGT CGGACGCGAT CGGCCTCGAC ATGCGCAACC AGCGCTTCCA GCTCGCGACG ATGAACGACA CCGAAGCCAG CGCGCAGGAC GTCGCCGCGT TCGAGGGCGA CCTGCGCAAG AAGCAGGTGC GCGTGCTGAT CTACAACAGC CAGGCCGAGG AGCCGATGAC CAAGCGCATG CTGAAGATCG CGCGCGACGG CGGCGTGCCG ACCGTCAGCG TCACCGAGAC GCAGCCGGCC GGCAAGACCT TCCAGCAATG GATGGGCGGC CAGCTCGACG CGCTCGGCAA CGCGCTTTCC GCCGGCAAGT AA
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Protein sequence | MSIALKRAPR RALSPVRWLA AAVAALSFAA PVVAQAATVN VVAAENFYGD VASQIGGRHV AVTSILSNPD QDPHLFEASP KTARALQHAQ VVIYNGADYD PWMGKLLGAS KQAKRATIVV ADLVGKKAGD NPHLWYDPAT MPAAARAIAA ELGRADPANK AEYEANLQKF VASLKPVDDK IAALRAKYKG VPVTATEPVF GYMSDAIGLD MRNQRFQLAT MNDTEASAQD VAAFEGDLRK KQVRVLIYNS QAEEPMTKRM LKIARDGGVP TVSVTETQPA GKTFQQWMGG QLDALGNALS AGK
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