Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1982 |
Symbol | |
ID | 4091144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2185793 |
End bp | 2186506 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638015261 |
Product | HAD family hydrolase |
Protein accession | YP_621856 |
Protein GI | 107023529 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.118092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGGCG CAAGCAAAGG CGCGGCCGGT CACGGCGTGA ACGTGCTGAT CTGCGATTGC GACGGCGTGC TGATCGACAG CGAGGCCGTG GCCGCCGACG TGATCGTGCG CGAACTCGAT GCGCGCTGGC CGGGCGTCGA TGCGCGGCCG GCCGTGATGC CGCTGCTCGG GCTGCGCATC GAGCGCGTGC TAGCTGGCGC GAGCGACGCG GTCGGCCGCA CGCTGTCGGC CGACGACGTC GACGCGATCC GCCGCGCGGT TGAGGCGGCG GCCGTCAACG CGCCGATGGT CGACGGCATC GATGCGGCGC TGGCCGCGAT CGACCTGACG ACGGCGTGCG CGAGCAACAG CTATCGCGCG TACGTCGAAG CGGCGCTCGC GCGCACCGGC CTCGCGCGCT TTTTCGGCGA CCGGTTGTTC TGCGCGGATT CGGTCGCGCG GCCGAAGCCG GCGCCCGACG TGTATCTGGC AGCCGCACGC GCGCTCGGCG TGGTGCCCGC GCAATGCCTG GTGGTCGAGG ACAGCGTGAC CGGCATCACC GCGGCGGCCG CGGCCGGCAT GACCGTGCTC GGCTTCGTCG GCGGCGGGCA CGCGTCGGCG GCGCAGATCG ACGCGTTGCG CGGCATCGGC GCGCGGCACG TATTCGACGA CATGCACGAG CTGCCCGGCT ACGTCGCGCG CTGGCAGGCG ACGGGCGCGG TGCTGCCGAA CTAG
|
Protein sequence | MSGASKGAAG HGVNVLICDC DGVLIDSEAV AADVIVRELD ARWPGVDARP AVMPLLGLRI ERVLAGASDA VGRTLSADDV DAIRRAVEAA AVNAPMVDGI DAALAAIDLT TACASNSYRA YVEAALARTG LARFFGDRLF CADSVARPKP APDVYLAAAR ALGVVPAQCL VVEDSVTGIT AAAAAGMTVL GFVGGGHASA AQIDALRGIG ARHVFDDMHE LPGYVARWQA TGAVLPN
|
| |