Gene Bcen_1902 details

Gene Information

• Locus tag: Bcen_1902
• Symbol: lspA
• ID: 4091644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 2100437
• End bp: 2100937
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638015183
• Product: lipoprotein signal peptidase
• Protein accession: YP_621778
• Protein GI: 107023451
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGA CCCTGTCGAA ACCGGCCAGC GGCGCGCTCG CGCCCTGGCT CGGTATTTCG 
CTGATCGTGA TCCTGTTCGA CCAGCTGTCG AAGATCGCGA TCCTGAAAAC GTTCGCGTAC 
GGCGCGCAGC ATGCGCTGAC GTCGTTCTTC AACCTCGTGC TGGTGTACAA CCGCGGCGCC 
GCATTCGGCT TCCTGTCGAC CGCGAGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC 
GTCGGCGCGA CGCTCGTGAT CTGCTTCCTG CTGAAGCGCC ACGGCCACCA GCGGCTGTTC 
AGCGTGTCGC TCGCGCTGAT CCTCGGCGGC GCGCTCGGCA ACGTGATCGA CCGGCTCGTC 
TACGGTCACG TGATCGACTT CCTCGATTTC CACCTCGGCG CGTGGCACTT CCCGGCATTC 
AACCTCGCCG ATTCCGCGAT CACGGTCGGC GCGGTGCTGC TGATCTACGA CGAGCTGCGT 
CGCGTGCGCG GCGCGCGCTG A 

 

Protein sequence

MAKTLSKPAS GALAPWLGIS LIVILFDQLS KIAILKTFAY GAQHALTSFF NLVLVYNRGA 
AFGFLSTASG WQRWAFTALG VGATLVICFL LKRHGHQRLF SVSLALILGG ALGNVIDRLV 
YGHVIDFLDF HLGAWHFPAF NLADSAITVG AVLLIYDELR RVRGAR