Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1695 |
Symbol | |
ID | 4091026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1875573 |
End bp | 1877444 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638014974 |
Product | Lipid A export ATP-binding/permease protein MsbA |
Protein accession | YP_621572 |
Protein GI | 107023245 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.733558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGCC CTTTTCGGCA CCCGCCCGAC AGGGCGCACA CCCGGGCGGC CACGTGCCGG GCGCCGCATC GCGGCTCAAG AAGGATTGCC TTGGAAACCC AGAACACTCT TCGCAAACCG ATGGACGGCA CCGGCACCTC GCCGATGACG GTCCTCAAGC GCCTGTGGCC GTACATCCGG CCGCTCATCG GCATCGTGGT GCTCGCCGTG GTGACGATGG GCGTCGTCGC GGCCACCGAG GCCGGTATCC CGGCCCTGCT CAAGCCGCTG CTCGACCACG GCTTCGGCTC GCACGGCAGC GACAGCGCGA AATGGTACGT GCCGATCGCG GTGATCGGGC TCGCGCTCGT GCGCGGCGTG TCGCAGTACA CATCGAATTA CCTGCTCAAC TACGTATCGA ACCGCATCCT GCTGCAGCTG CGGCTCGAGA TGTTCCAGCG GATGATCCAT ACCGGCGCGT CGTTCTTCCA GCGCGAAACC GCGAGCACGG TGATCAACGC GATCGTGTTC GAGGTCAACC AGATCCTGTC GGTGCTGACG GGCGTGATGG TCACGCTCGT GCGCGATTCG CTGACGGTGA TCTTCCTGCT CGGCTACCTG TTCTACCTGA ACTGGCGGCT CACGCTGATC GTCGCGGTGA TCCTGCCGGG CATCGGCTGG CTCGTCAGCA AGATCAACCG CCGGCTGCGC CGCCTGAACC GCGAGCACCA GACGCTGACC AACGAGCTGT CGTACATCGT CGAGGAGACG GTCGGCGGCT ACAAGGTCGT CAAGGTGCAC AACGGCGAAG CGTACGAGAT GGACCGCTTC ACGACGATGA GCAAGCGCCT GCGCGGCTAC GCGATGCGCA TGACGATCTC GGGCGGCCTC GCGCAGCCGC TCACGCAGTT CCTCGCGTCG ATCGCGCTCG CGGTCGTGAT CACGATCGCG GTCGTGCAGT CGTCGAACGA CCAGACGACG GTCGGCGGTT TCGTCGCGTT CGTCACGTCG ATGCTGCTGG TGATCTCGCC GCTCAAGCAC CTGATCGACG TCAACCAGCC GCTGCAGCGC GGGATGACGG CCGCCGAGCT GATCTTCGGG CTGATCGACG AGCCGGCCGA GCCGCAGGGC GGCGGGCGGC CGCTGTCGCA GGCGCGCGGC GAGATCGAGT TCCGCGCCGT GTCGTTCGAC TACGGCGCGG CCGAACGGCC GACGCTCGAC CGCATTTCGT TCAAGGTCGC GCCGGGTGAA ATGATCGCGC TGGCCGGCCC GTCCGGGAGC GGCAAGACGA CGCTCGTGAA CCTGCTGCCG CGCTTCTTCG ACCCGACGGA CGGCACGATC CTGGTCGACG GCGTGCCGGT GTCCGACTAC GATCTCCACG CGCTGCGCAG CCAGATGGCA ATGGTCAGCC AGGACGTCGT GCTGTTCAAC GACACGATCG CCGCGAACGT CGCCTACGGG CAGACGCCCG ACCGCGCACG CGTGCAGGCC GCGCTCGAGG CCGCGAACCT CGCCGATGCG GTCGCCGCGA TGCCCGACGG GCTCGATACG CTGGTCGGCG GCAACGGGAT GCGGTTGTCC GGCGGCCAGC GCCAGCGGCT CGCGATTGCG CGCGCGATCT ACAAGGACGC GCCGATCCTG ATCCTCGACG AAGCGACGTC GGCGCTCGAT TCGGAGTCGG AGCGCCACGT GCAGGCCGCG CTCGAGCGGC TGATGGAAGG CCGCACGACG CTGGTGATCG CGCACCGGCT GTCGACGATC GAGCGCGCGG ACCGCATCCT CGTGCTCGAG GCCGGCAAGA TCGTCGAGGA GGGCAGCCAC GACGAACTGC TGCGCCACGG CGGCCTCTAC GCGCACCTGC ACCGGATCCA GTACCAGCAG CAGGCGGCGT GA
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Protein sequence | MLSPFRHPPD RAHTRAATCR APHRGSRRIA LETQNTLRKP MDGTGTSPMT VLKRLWPYIR PLIGIVVLAV VTMGVVAATE AGIPALLKPL LDHGFGSHGS DSAKWYVPIA VIGLALVRGV SQYTSNYLLN YVSNRILLQL RLEMFQRMIH TGASFFQRET ASTVINAIVF EVNQILSVLT GVMVTLVRDS LTVIFLLGYL FYLNWRLTLI VAVILPGIGW LVSKINRRLR RLNREHQTLT NELSYIVEET VGGYKVVKVH NGEAYEMDRF TTMSKRLRGY AMRMTISGGL AQPLTQFLAS IALAVVITIA VVQSSNDQTT VGGFVAFVTS MLLVISPLKH LIDVNQPLQR GMTAAELIFG LIDEPAEPQG GGRPLSQARG EIEFRAVSFD YGAAERPTLD RISFKVAPGE MIALAGPSGS GKTTLVNLLP RFFDPTDGTI LVDGVPVSDY DLHALRSQMA MVSQDVVLFN DTIAANVAYG QTPDRARVQA ALEAANLADA VAAMPDGLDT LVGGNGMRLS GGQRQRLAIA RAIYKDAPIL ILDEATSALD SESERHVQAA LERLMEGRTT LVIAHRLSTI ERADRILVLE AGKIVEEGSH DELLRHGGLY AHLHRIQYQQ QAA
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