Gene Bcen_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1672 
Symbol 
ID4093542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1852232 
End bp1852930 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID638014951 
Producttwo component transcriptional regulator 
Protein accessionYP_621549 
Protein GI107023222 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.193412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC CCAGCCTGAC CGTCGTCCTG ATCGAGGACG AAAAGCAGAT CCGCCGCTTC 
GTGCGCGCCG CGCTCGAAGA GGAGGACATC GCGGTGTTCG AGGCCGAGAC GGGCAAGCAG
GGGCTGATCG ACGCGGCGAC GCGCAAGCCC GATCTCGTGA TCGTCGATCT CGGCCTGCCC
GATACCGACG GCCTCGACGT GATCCGCGAG CTGCGCGGCT GGTCCGAGGT GCCGGTGATC
GTGCTGTCCG CCCGCACGCA GGAAGAGGAG AAGGTCGCGG CGCTCGACGC GGGCGCCGAC
GACTACCTGA CCAAGCCGTT CGGCGTGTCC GAACTGCGTG CGCGGATGCG CGCGCAACTG
CGCCGGCGCA ACCAGGGCGG CGCGAACGAG TCGCCGAAGG TGAGCTTCGG CACCGTGACC
GTCGATCTCG CGCTGCGCCA GGTGTGGCGC GACGACGCGA TCGTCCACCT GACGCCGCTC
GAATACCGGC TGCTCGCGAC GCTCGTGCGT CACGCGGGGC GCGTGCTCAC GCACCGCCAG
CTGCTGCGCG ACGTGTGGGG GCCGTCGCAC GTCGAGAGCC ATCACTATCT GCGCATCTAC
ATGGCGCACC TGCGCCAGAA GCTCGAGGCC GATCCCGCGC AGCCCGAGCA CATCGTCACC
GAGACGGGCG TCGGCTACCG GCTCGTCGGC GCCGTGTGA
 
Protein sequence
MSEPSLTVVL IEDEKQIRRF VRAALEEEDI AVFEAETGKQ GLIDAATRKP DLVIVDLGLP 
DTDGLDVIRE LRGWSEVPVI VLSARTQEEE KVAALDAGAD DYLTKPFGVS ELRARMRAQL
RRRNQGGANE SPKVSFGTVT VDLALRQVWR DDAIVHLTPL EYRLLATLVR HAGRVLTHRQ
LLRDVWGPSH VESHHYLRIY MAHLRQKLEA DPAQPEHIVT ETGVGYRLVG AV