Gene Bcen_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1590 
Symbol 
ID4092875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1764094 
End bp1764483 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content68% 
IMG OID638014864 
Productcytidine deaminase, homotetrameric 
Protein accessionYP_621468 
Protein GI107023141 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.672305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGAG ACGAACTGAT CGAACAGGCG AAGGCGGCGC GCGAACGCGC GTATGCGCCG 
TATTCGCGCT TCAAGGTCGG CGCGGCGCTG CTGGCGCGCG ACGGGACGGT CTTCCACGGC
TGCAACGTCG AGAACGCGTC GTACGGCCTG TGCAATTGCG CGGAACGCAC GGCGCTGTTC
GCGGCGATCG CCGCCGGCTA TCGGCCCGGG GATTTCGCGC GGCTCGCGGT GGTGGGCGAC
ACGGACGGAC CGATCGCGCC GTGCGGCGCA TGTCGTCAGG TGATCATCGA GATCGGCAAG
CCCGACATCG AAGTGATCCT CACGAACCTG AAAGGGGCCG TCGAGATCAC GACGGCCCGC
GCATTGCTGC CGGGCGCGTT CACGCTGTAG
 
Protein sequence
MERDELIEQA KAARERAYAP YSRFKVGAAL LARDGTVFHG CNVENASYGL CNCAERTALF 
AAIAAGYRPG DFARLAVVGD TDGPIAPCGA CRQVIIEIGK PDIEVILTNL KGAVEITTAR
ALLPGAFTL