Gene Bcen_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1565 
Symbol 
ID4092677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1741131 
End bp1742573 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content64% 
IMG OID638014839 
Productmajor facilitator transporter 
Protein accessionYP_621443 
Protein GI107023116 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.523471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC CTTCGACCGC CTGCGGCGTC GACCTTGGTC GATCCGCGAG CGAAACGCGT 
CCCATGAGCG AGCAACTGCG GGCGGCGAAC CTGCTGTTCC GCATCGAAAA CGTGCCGTTC
TGCAAGTGGC ACACCCAGGC ACGGATCGTC ATGGGCAGCG CGACCCTCTT CGATGCATTC
GATGCACTTT CGCTGGCTTT CGTGCTGCCC GTCCTGGTGG GGCTGTGGCA TCTTTCTGCC
GGTCAGATCG GCGTGCTGAT CGCTGCGGGC TATCTGGGCC AGGTCGTCGG CGCGTTGGTC
TTCGGCTGGC TGGCCGAGCG CCTGGGGCGA GTGCCGAGCG CTACTGTCGC GGTGGGCGTC
ATGTCGGCGA TGAGCGTCGT ATGCGCGTTC ACCGGCAGCT TTCACATGCT GTTTCTGATG
CGCTTCCTGC AAGGCATCGG CGTGGGCGGA GAAGTGCCCG TGGCCGCTAC GTACATCAAC
GAGCTGTCTC AGGCGCACGG CCGCGGGCGT TTTTTCATCC TGTACGAACT CATTTTCCCG
TTGGGCCTGC TCGCGGCCGC GCAGCTCGGT GCGTTCGTCG TCCCGCGCTT CGGCTGGGAA
ACTATGTTCC TGATCGGCGG GATTCCCGGC ATGGTCGTCG CGATCCTGAT CGCACGCCTT
CCGGAATCGC CGCGCTGGCT CGTTGCACGC GGGCGTTTCG ATAAGGCCGA ACGCATCATC
GAGCGGCTGG AAGCCAGCAC GACGAAGCGC AACCTCGACA TACAAGTCCA AAGGGCCGAG
GTGGACGCGC GCGTGGCGAG CCTTCTGGTC GGACGACAGT CGAAGCGGAA GGGAACCTGG
AAGGAACTCT TCTCGCCGTT CTATCGAGGC CGCACCGTCG TCGTGTGGCT GCTTTGGGCG
AGCGCGTATT TCGTGGCCAA CGGCATCAAC AACTGGCTGC CGAGCCTCTA CAGGACGGTC
TACCATCTGC CGCTGCAGAC GTCGCTTCAG ATGGCATCCA TCTCGAACGT CCTGAGTACG
TGCGGGGTGC TTGCCTGTGC GCTGCTGATC GATCGGGTCG GGCGCCGCCG GTGGGCAATG
GCCTGCTTCA TCATCAGTGC AGCCCTGCTC GCCGTACTCG GCATTCATGG CGCAGGCAGC
GCCTGGTCCG TGATGTTGCT CGGATCGTCG GCGTACGCGG TGATGGCAAC GACCACGGTC
CTTCTGTACC TGTACACCCC GGAGATCTAC CCCACCCGGA TGCGCGCCAT CGGTACCGGT
CTTGCGACTT CGTGGCTGCG CGCGGCGTCT GCTGCCGCGC CGGCGATCGT CGGCGTCGTA
TTGACCGGGA AAGGCATCGC CGCGGTATTC GTCATGTTTG CCGCGGTCAG TGCGGTGGGC
TTCTTCGTCG CCGCGCGAAT GGTGGAGACG ACCAATCGTT CGCTCGAGGA AATTTCTCCG
TAG
 
Protein sequence
MNTPSTACGV DLGRSASETR PMSEQLRAAN LLFRIENVPF CKWHTQARIV MGSATLFDAF 
DALSLAFVLP VLVGLWHLSA GQIGVLIAAG YLGQVVGALV FGWLAERLGR VPSATVAVGV
MSAMSVVCAF TGSFHMLFLM RFLQGIGVGG EVPVAATYIN ELSQAHGRGR FFILYELIFP
LGLLAAAQLG AFVVPRFGWE TMFLIGGIPG MVVAILIARL PESPRWLVAR GRFDKAERII
ERLEASTTKR NLDIQVQRAE VDARVASLLV GRQSKRKGTW KELFSPFYRG RTVVVWLLWA
SAYFVANGIN NWLPSLYRTV YHLPLQTSLQ MASISNVLST CGVLACALLI DRVGRRRWAM
ACFIISAALL AVLGIHGAGS AWSVMLLGSS AYAVMATTTV LLYLYTPEIY PTRMRAIGTG
LATSWLRAAS AAAPAIVGVV LTGKGIAAVF VMFAAVSAVG FFVAARMVET TNRSLEEISP