| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1564 |
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| Symbol | |
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| ID | 4092676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1739871 |
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| End bp | 1740944 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638014838 |
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| Product | porin |
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| Protein accession | YP_621442 |
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| Protein GI | 107023115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.247151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CACGACAGGT CGTGGTGCGC GTTGCCGCCC GGCGCGTTGT CGGTACGGTC
GGCGTGACGG CGATATTCAG CGCCGGTCTG GTATTGCATT CCGTCGGGGC ATACGCGGAT
AGCGGCTCCC AGGTCCAGCT TTATGGCCTC CTCGGCACCT ACGTCGGCAG TATCAAACGC
AGCGACACGC CGCAGGCTGC GGTACAGATG GGGAGCGGCG GGCTGACCAC GTCGTTCTGG
GGAATCCGCG GCAAGGAAGA CCTTGGCGGC GGCGTCGGCG CCATTTTTGT CCTCGAGAGC
TTCTTTCAAC CCGCAAACGG CGCGCTGGGG CGCAGTGCGG CGGACCCGTT CTGGTCACGC
AATGCGTACG TGGGCTTTCA AGGCGACTTC GGGCAGGTGA CCTTCGGGCG ACAAAGAAAC
CCGGCCTATA CGGCTGAATC CCTCGTCAAT CCGTTCGGAT CCTCGACCGT CTTCTCTCCG
CTCGTCCTGC AGACGTTCGT GACCAACTAT GGCGGGACGA TCATCGGCGA TACGGTGTGG
AACAACACCG TCAAGTACAC GACGCCCGAC TTCAAGGGGT TCGCCGCCAC CGTCATCTAC
GGTCTTGGCG GCGTGGCGGG TTCACCCGGC GTCGGTAATC TCGGCGTTCA CTTGAACTAT
CGAGGGCACG GTCTCACGGC CGTGCTGTCC GGCCAGCGCG TGCGGTATAC CGCGGCAGGG
CCGGTCGGCG CGCAGTATGC CTATCTGGCT GGCGCGGCAT ACGACTTCAA GCTCGTCACG
CTCTATGGCG CGTGGGCGAT GACGAGCGAT GCAAGTACGC CGACCGGCAG CCACACCTAT
GAGGCGGGTT TGTCGATCCC GTTGTCACCC GCCGACTTCC TGCTTGCAGA GTGGGCGCGC
ACGAAGCGGT CCGGCGCTAC CCGAGCGGCG AGCGGCCTGC GGAACACCGC GTCTGTCGGC
TACAACCACC TGCTGTCGAA ACGGACGGAC CTCTACGCGA TTTACGCTTA CGACAAGCTG
AGCGCACACC CCATCGGCAA CTCGTTTGCG GTGGGCATTC GCCACACGTT CTGA
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| Protein sequence | MKKTRQVVVR VAARRVVGTV GVTAIFSAGL VLHSVGAYAD SGSQVQLYGL LGTYVGSIKR
SDTPQAAVQM GSGGLTTSFW GIRGKEDLGG GVGAIFVLES FFQPANGALG RSAADPFWSR
NAYVGFQGDF GQVTFGRQRN PAYTAESLVN PFGSSTVFSP LVLQTFVTNY GGTIIGDTVW
NNTVKYTTPD FKGFAATVIY GLGGVAGSPG VGNLGVHLNY RGHGLTAVLS GQRVRYTAAG
PVGAQYAYLA GAAYDFKLVT LYGAWAMTSD ASTPTGSHTY EAGLSIPLSP ADFLLAEWAR
TKRSGATRAA SGLRNTASVG YNHLLSKRTD LYAIYAYDKL SAHPIGNSFA VGIRHTF
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