Gene Bcen_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1563 
Symbol 
ID4092675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1738533 
End bp1739636 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID638014837 
Productputative integral membrane sensor protein 
Protein accessionYP_621441 
Protein GI107023114 
COG category[T] Signal transduction mechanisms 
COG ID[COG3300] MHYT domain (predicted integral membrane sensor domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGA CCAGTTATAA CGCGTTGCTC GTTCTTCTTT CGCTGCTGAT TGCCATATTG 
GCGTCCTACA CCGTGCTGGA CATGGCCGGG CGCATCAAGA GCGCTCAGGG GCACGCCGCA
CGGTGGTGGC TGGTCGGCGG GGCTTGCGTG ATGGGCACGG GCATCTGGTC GATGCATTTC
GTCGGCATGC TCGCTTTCGC GTTGCCGATT CCACTGGGAT ACGATCCGGC CATTACCTTG
CTGTCGTTGC TGATCGCGAT CGTCTGCTCC ACGTGCGCGC TGTGGCTCGT CTGCCGGGAC
ACGCTGAAGT GGCGCCGGCT GTGCGGCGGG GCCATGTTGA TGGGGGCCGG CGTGGCGGGC
ATGCATTACA CGGGCATGGC GTCGATGCGC ATGTCGCCCG GCATCCAGTA CGACCCGTTG
CTCGTTTGCC TGTCGGTCGC GATTGCCGTG GTCGCATCGG GCGCCGTACT GTGGATCGTA
TTCATTCGGC GTGCCAACTC GTCGCGCGTG CGGCTGCTCA ATCTGGGATC GGCCGTCCTG
ATGGGCGCCG CCATCGCCGG CATGCACTAT ACCGGGATGG CCGCCGCCCG ATTCCCGCTC
GGCAGCCTCT GCGGGGCAGC CGGCTCGCGC ATGGACGCCG GCTGGCTTGC ACTGGTCATC
ATCGTCGCCA CGTTGGCCAT ACTCGCCATC GCGTTGATCG TCTCCATCCT CGACCTGCGT
CTGGAGGCCC GCACGGCGGT ACTGGCCACG TCACTGGCCG AAGCCAACCA GGAATTGACG
TATCTGGCGC TGCACGACAA CCTCACCAAG CTGCCCAATC GCGTGCTGCT CGAGGACCGG
ATCGATCAGG CGATCCAGGC CGCCGACCGC GAGCACGGAA GCTTCGCGCT GATGTTCATG
GACCTCGATG GATTCAAGGC GGTCAACGAT GCCTATGGTC ATCACGTCGG CGATCTGTTG
CTGGTCGACG TGGCGCGGCG CATCGGCGCG AACCTGCGTT CGCAGGACAC GATTGCCCGC
CTGGGGGCGA CGAATTCGTG CTGGCCGTGG CAGTGGACGA GCCCGCGGAC GCGGCCGACG
TGGCGGACAA GATATTGGCG GTGA
 
Protein sequence
MLPTSYNALL VLLSLLIAIL ASYTVLDMAG RIKSAQGHAA RWWLVGGACV MGTGIWSMHF 
VGMLAFALPI PLGYDPAITL LSLLIAIVCS TCALWLVCRD TLKWRRLCGG AMLMGAGVAG
MHYTGMASMR MSPGIQYDPL LVCLSVAIAV VASGAVLWIV FIRRANSSRV RLLNLGSAVL
MGAAIAGMHY TGMAAARFPL GSLCGAAGSR MDAGWLALVI IVATLAILAI ALIVSILDLR
LEARTAVLAT SLAEANQELT YLALHDNLTK LPNRVLLEDR IDQAIQAADR EHGSFALMFM
DLDGFKAVND AYGHHVGDLL LVDVARRIGA NLRSQDTIAR LGATNSCWPW QWTSPRTRPT
WRTRYWR