Gene Bcen_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1534 
SymbolpdxA 
ID4092646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1706842 
End bp1707867 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID638014808 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_621412 
Protein GI107023085 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACC GTCCCATCAT CGGCATCACC ATGGGCGACG CGGCCGGCGT CGGACCGGAA 
ATCATCATGA AGAGCCTCGC GCATGCATCC GTGTACGAGG AGTGCCGCCC CGTGGTCGTC
GGCGACGCCG CGCGCCTGCG CGATGCAGGC CGCAGAGCCG GTGTCGATCT CGAGGTGAGC
GCGATCGGCC GTCCGTCCGA AGGCGCGTTC CGCGTGGGCG TCGTCGATTG CATCGACCTC
GCGCTGATTC CGGCCGACCT GCCTTATGGA AAGCTGTCGG CGATCGCGGG AGACGCCGCG
TACCAATACA TCGCGCGCAC CGTCGAACTG ACGTCGAAAG GCGAGCTCGA CGCGATCTGC
ACCGCGCCGC TGAACAAGGA AGCGCTGCAT GCCGGCGGCC ACATTTTTCC CGGCCACACG
GAAATGCTCG CTCATCTGAC CGGCATCGAC GAGGTGTCGA TGATGCTGGT CGCACCCAAT
CTCCGGGTGA TCCACGTGAC GACGCACATC GGCCTGCTCG ACGCGATCCG CAAGATCGAG
CCGGGCCTCG TGCAACGCAC GATCGAACGC GGGCACGACA CGCTGGTGCG CGCCGGCATC
GCGAATCCGC GCATCGGCGT CTGCGGGATC AACCCGCATG CCGGCGAGAA CGGGCTGTTC
GGCTACGGCG AAGAGGAAGA GAAGATCGTG CCGGCGGTCG AAGTCCTGCA GGCGCGCGGC
TGGGACGTGG AAGGCCCGCT GCCGGCCGAT ACGCTGTTTT TCCGCGCGGG CCGCGGCGAT
TTCGACGTGG TCGTCGCGAT GTATCACGAC CAGGGACACG GGCCGGTAAA GGTGATGGGC
CTCGAAGCCG GCGTCAACGT GACGGTCGGC CTGCCCGTGA TCCGCACGTC CGTCGACCAT
GGCACCGCGT TCGACATCGC GGGCAAGGGC ATCGCCGACG AACGCAGCCT GCTCGAAGCG
TTCCGCCAGG CCGTGGATCT CGCGACGCGG CGCAACGAAT CGTCGCCCGT GGCCAGCGCC
GCGTAA
 
Protein sequence
MDNRPIIGIT MGDAAGVGPE IIMKSLAHAS VYEECRPVVV GDAARLRDAG RRAGVDLEVS 
AIGRPSEGAF RVGVVDCIDL ALIPADLPYG KLSAIAGDAA YQYIARTVEL TSKGELDAIC
TAPLNKEALH AGGHIFPGHT EMLAHLTGID EVSMMLVAPN LRVIHVTTHI GLLDAIRKIE
PGLVQRTIER GHDTLVRAGI ANPRIGVCGI NPHAGENGLF GYGEEEEKIV PAVEVLQARG
WDVEGPLPAD TLFFRAGRGD FDVVVAMYHD QGHGPVKVMG LEAGVNVTVG LPVIRTSVDH
GTAFDIAGKG IADERSLLEA FRQAVDLATR RNESSPVASA A