Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1480 |
Symbol | |
ID | 4091996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1644021 |
End bp | 1644941 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638014755 |
Product | AraC family transcriptional regulator |
Protein accession | YP_621359 |
Protein GI | 107023032 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.237942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGACA CCGTCATCGC CGCGCCGGTG GCAGCGCCTT CGCGGCGGCC GAAAGACACG CTCGGCTGCG TGTCGAGCCT GCTGGCGAAG GATGTCGAGA CGACATCCGG CGGCCTGAAG CTCCACCGCA AATGCATGCG TGAAGCGCAC GTCGAACGCA TCGAGATGCC CGCGTGCGAC CGCGGCTTCC TGGTCGGCGT GTCGCTGACC GGCGGCCACC GCCGCACGCT CTACGGGCGC GCCGGCGCGA GCGAACGCCG GTTCCAGCAT CACTCGATCT ACATTCGCGA TTTTTCCCGT CATTTCCATG CCGACCTGTA CGGCAACTTC GACTTCGTGC TGGTCGAGCT GCCGCATGCG TATCTGGCAC GCATCGGCCC CGAGCACGGC GGCAGCCCGG TCGACGGCCT CACGTGCCGC GTCGATGCGC GCGACCCGGT GCTCGGGCAT CTCGCGCACG CGGTGGCCGA CAGCCTCGAC ACACCCGGCC CGCTGAACGC GCTGTTCATC GAACAGGTCG GGCTCGCGAT GGGCGCGCAT CTCGTGCGCC GCTACGGCAA CGCGCGCACG CGCGAGCTCG AGCACAAGGG CATGCTGTCG CCCGCGAAGG TCGCGCGCGC CCAGGAGTTG CTGATGGAAA AGGCGGACCT CGGCGTGTCG ATCGAGGAAG TCGCGAACGA ATGCGACCTG TCGCGCGGGT ATTTCATCCG CGCGTTCTCG CGCACCACCG GCCGCACGCC GCACCAGTGG CTGCTCGAAC AGCGCGTGAT GCGCGCGCGC GAGCTGATCG AGACGTCCGA CATGACGCTG GCCGACATCG CGGTCGCGTG CGGCTTCGCC GACCAGAGCC ATCTGAACCG CCTGTTCGCG CGGATCGTCG GTCATCCGCC CGGCGCGTGG CGGCGCGCAC GGTCGCGCTG A
|
Protein sequence | MSDTVIAAPV AAPSRRPKDT LGCVSSLLAK DVETTSGGLK LHRKCMREAH VERIEMPACD RGFLVGVSLT GGHRRTLYGR AGASERRFQH HSIYIRDFSR HFHADLYGNF DFVLVELPHA YLARIGPEHG GSPVDGLTCR VDARDPVLGH LAHAVADSLD TPGPLNALFI EQVGLAMGAH LVRRYGNART RELEHKGMLS PAKVARAQEL LMEKADLGVS IEEVANECDL SRGYFIRAFS RTTGRTPHQW LLEQRVMRAR ELIETSDMTL ADIAVACGFA DQSHLNRLFA RIVGHPPGAW RRARSR
|
| |