Gene Bcen_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1212 
Symbol 
ID4093424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1336053 
End bp1337243 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID638014488 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_621092 
Protein GI107022765 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCC CCCTGGACGG CATCCGCGTG CTGGAGCTTG GCCAATTGAT CGCCGGGCCG 
TTCGCGGGCC GGATGCTCGC CGAATTCGGC GCGGAGGTCA TCAAGGTCGA GCCGCCCGGC
GTCGGCGATC CGCTGCGCAA ATGGCGGCTG CTGCACGACG GCACGTCGGT CTGGTGGGCC
GCGCAGTCGC GCAACAAGAC CTCGCTCACG CTCGATCTGC GCACGCCCGA AGGGCAGGAC
GTCGTGCGCC GCCTCGTCGC CGACACCGAC GTGCTGATCG AAAACTTCCG GCCCGGCACG
CTCGAAGGCT GGGGGCTCGG CTGGGACGCA CTGTCCGCGA TCAACCCGGG GCTCGTGATG
CTGCGCGTGT CGGGCTTCGG GCAGACGGGC CCGTATCGCG ACCGGCCCGG CTTCGGCGTG
ATCGCCGAAG CAATGGGCGG CCTGCGCCAC CTGACCGGCG AACCGGGCCG CACGCCGGTG
CGCGTCGGCA TCTCGCTCGG CGATTCGCTG TCGGCACTGC ATGGCGTGAT CGGCGTGCTG
CTCGCGTTGC GCCATCGCGA ACGGCAGGGC GGCAAGGGGC AGGTCGTCGA CGTCGCGCTG
TACGAATCGG TGTTCAACAT GATGGAAAGC CTGCTGCCCG AATATGCGGC GTTCGGCGCG
GTGCGCGAGC CGGCCGGCAG CAGCCTGCCG GGCATCGCGC CGACCAACGC GTACCGTTGC
CGCGATGGCA AGTACGCGCT GATCGCCGGC AACGGCGACA GCATCTTCCG GCGCCTGATG
GAACTGATCG GTCGGCCCGA TCTCGGCAAC GATCCGGCGC TCGCCCGCAA CGACGGGCGC
GTCGCGCAGG TCGCGCGCAT CGATGCGGCG ATCGGCGAAT GGAGCGCCCG CCACGACCTC
GACGACGTGC TCGCCGCGCT GAACGACGCG CGCATTCCGT CCGGACGCAT CTACGACGTG
GCCGACATCG CGGCCGATCC GCACTACCGT GCGCGCGACA TGATCGTCGA CGCCGCGCTG
CCCGACGGCA CGCCCGTGCT GGTGCCGGGC ATCGTGCCGA AACTCGACGC GACGCCCGGG
CGCATCGAGC GACCGGCGCC CGCGCTCGGC GCGGATACCG ACGCGGTCCT CGAATCGCTC
GGCATCGATG CGGCGACGCG CGACGACTGG CGCACGCGCG GCGTGATCTG A
 
Protein sequence
MTRPLDGIRV LELGQLIAGP FAGRMLAEFG AEVIKVEPPG VGDPLRKWRL LHDGTSVWWA 
AQSRNKTSLT LDLRTPEGQD VVRRLVADTD VLIENFRPGT LEGWGLGWDA LSAINPGLVM
LRVSGFGQTG PYRDRPGFGV IAEAMGGLRH LTGEPGRTPV RVGISLGDSL SALHGVIGVL
LALRHRERQG GKGQVVDVAL YESVFNMMES LLPEYAAFGA VREPAGSSLP GIAPTNAYRC
RDGKYALIAG NGDSIFRRLM ELIGRPDLGN DPALARNDGR VAQVARIDAA IGEWSARHDL
DDVLAALNDA RIPSGRIYDV ADIAADPHYR ARDMIVDAAL PDGTPVLVPG IVPKLDATPG
RIERPAPALG ADTDAVLESL GIDAATRDDW RTRGVI