Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1175 |
Symbol | |
ID | 4092615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1292473 |
End bp | 1294722 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638014451 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_621055 |
Protein GI | 107022728 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCGA ATGATTGTCG TTTTCAACTA CACAAGATAA AATTCACCCA ACAACACAAA CCACCGCGCA ACGGCCATGT GAGGCAATCA CTCAGTCATC CTCAAATTTC CATGTCGAAA CGACAGATCT CCGGGCGGCG TTTTCCTGTG CTGGCCCTGT CGCTGTGCTC GATCGCCGGC GTTGCTTCCT CCCCTGCTCC AGCAGCCGAG TTCGACGACG AACTGCCTGC GGTCGAAGTA CGCAGCCGTC GTCATCCAAA CGATCCGCGC GCCGAAAGCG TGAGTACGGC GACGCGCACC GCGAGCGATC CGCGCGACGT ACCGCAAACC ATCGACAGCG TCCCGGTAGA GGAAACGCTG TCCTATGGCG GTCGCACGCT GGCCGACGCG CTGGCCGGCG TGCCCGGTGT GTCCAATACG TCGGACACGC GCTTCGATTC GTTCCGCATT CGCGGCTTTT CCGCCGCGGG CGACCTGCTG CTCGACGGCA TGCGCGACGA TGCGCAATAC GTGCGCAGTC TCAGCAACAT CGAACGCGTC GAAGTGCTGA AGGGGCCGGC AGCGGCGCTG TACGGGCGCG GCAGCGGCGG CGGCGTCATC AACCGGATCA CCAAGCAGCC GTTGCCGGAA AACTTCGGGC ATCTGTCGGC GGCGACCGGC AGCTATGGAC GGCTCGGCGC GTCGGTCGAT CTCAACCGGA TGCTGTCGAG CGCATGGAGC GTGCGGCTCA ATGCCGGACG CGAACACGCA GGCAGCTTCC GCGACCACGT CGACAGCACG CGTCAGTACG TCGCACCGTC GATCAAATGG CACGACGCGC GGCGCAGCTG GCTGCTGCAG TTCGAATACG ACGCGTACCG GCGCGTGCCC GATCGCGGCA TGCCGGCGCC GGTCGCCGCG CTCGACGCGG CCGGCAAGCC GTTCGCGTTC TCGCTGCCGT CCGCGCCACG CGCAACCTTC TTCGGCGCGG CGGGCCGCGA CACGATTCGC GACGAGAACA TGAACTGGCG CTCGGTCTTC ACGCACGCGC TCGACGGCGA CTGGGAATTG CGCCATACGC TCGGCGTGCT GAATTTGCGC AGCACCTTCG ACAATACCTA CGTCACGCAA AGCTACGTCG CGAAGCCGCG CGACTACCGG CATGTGCAAC GCGCACGCTA TCTGCAGGAC ATGACGCATC TCAACGTCCA GACCGGCGTC GAACTGGGCG GCAAGGTCGC AACCGGTCCG GCGCTGCATC ACCTGCTGTT CGGTATCGAA TACGGCTGGC AGAAACGCGC GCCGACGCTC TGGCAGGCCG ACGCGGCGCC GATTCCGGTG ACCGGGCCGG ATCGTTTCGC CCTGGTCGGC TCGACGCCGC GCCCGTATGC GATGAACCGC CACCGCGTCA GCGACTACGC GATCTTCGCG CAGGATCGCG TCGACCTCGG GCGAGCGTGG AAGCTCCTCG GCGGCCTGCG CGGGGAACGT TTCGACGTCG ATTCGACCAA CGCGCTGAAC GGCCTGCATG CACGGCGCAC GACGGCGGCA TGGAGCCCGC GGCTCGGCGT CGTGTGGTCG CCGGTCGGCA CGCACAGCCT GTATGCGTCG TACAGCAAGA ACTTCGCGCC GGTCGGTGGC GACCTGATCG GCATCACGCC CGACGCGCGC GGCAACGCCA ACGACCTCGG CCCGCAATAC ACGCGCCAAT ACGAGATCGG CGTGAAAAGC GACTGGCGCG ACGGCGCGCT GAGCACGACG CTCGCGCTGT TTCAGCTCGA CCTGTACAAC CGCCGCATCG CCGATCCGGT TCGGCCGGGC TTTTTCGACC TCACCGGCCT CGAGCGCAAT CGCGGCCTGG AACTGGGCGT CGCCGGCCGG CTCGCGGGCG ACTGGTTCGT CCGCGGCGGC ATCGGCTGGC AACACGCGCG GGTGGTCGAC GCCGAGCCGA AGTACGCGGG CAAGCGCTCG GCGGGCGTGT CGGCGTCGAA CGGCAGCCTG TTCGTCGGCC ATGCGCCGCT ACGCGGTTTT TTCGCGGAAC TCGGGCTGGT GTACGAAGGC GCGCGTTACG CCGATCGCGA CAACCTGCTC GAATTGCCCG CGTACGTTCG CTGGGACGGC AAGGCCGGCT ATCGCACGCG CGACTTCGAG GTGACGCTGG CGGCCGTCAA CCTGACCGAT CGCGATTACT ACGCGAATGC GACGGGCCTC GCGCAGATCA TGCCCGGTAC GCCACGCACG TTCACGCTGA CGGCGGCATA CAAGTTCTGA
|
Protein sequence | MNANDCRFQL HKIKFTQQHK PPRNGHVRQS LSHPQISMSK RQISGRRFPV LALSLCSIAG VASSPAPAAE FDDELPAVEV RSRRHPNDPR AESVSTATRT ASDPRDVPQT IDSVPVEETL SYGGRTLADA LAGVPGVSNT SDTRFDSFRI RGFSAAGDLL LDGMRDDAQY VRSLSNIERV EVLKGPAAAL YGRGSGGGVI NRITKQPLPE NFGHLSAATG SYGRLGASVD LNRMLSSAWS VRLNAGREHA GSFRDHVDST RQYVAPSIKW HDARRSWLLQ FEYDAYRRVP DRGMPAPVAA LDAAGKPFAF SLPSAPRATF FGAAGRDTIR DENMNWRSVF THALDGDWEL RHTLGVLNLR STFDNTYVTQ SYVAKPRDYR HVQRARYLQD MTHLNVQTGV ELGGKVATGP ALHHLLFGIE YGWQKRAPTL WQADAAPIPV TGPDRFALVG STPRPYAMNR HRVSDYAIFA QDRVDLGRAW KLLGGLRGER FDVDSTNALN GLHARRTTAA WSPRLGVVWS PVGTHSLYAS YSKNFAPVGG DLIGITPDAR GNANDLGPQY TRQYEIGVKS DWRDGALSTT LALFQLDLYN RRIADPVRPG FFDLTGLERN RGLELGVAGR LAGDWFVRGG IGWQHARVVD AEPKYAGKRS AGVSASNGSL FVGHAPLRGF FAELGLVYEG ARYADRDNLL ELPAYVRWDG KAGYRTRDFE VTLAAVNLTD RDYYANATGL AQIMPGTPRT FTLTAAYKF
|
| |