Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1164 |
Symbol | |
ID | 4093390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1280664 |
End bp | 1282928 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638014440 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_621044 |
Protein GI | 107022717 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0408687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TGGAGCAGAA GAAGATGGAG TGGGCAACAG GCACGCGTTT GCGTGCGATC GCAGCCGCGG CAAGCGTGGC GTTCGGTACG GCGGCGGCAG GGCACGCATA CGCCCAGACG GCGCCGGCCG TGAACGCGGG CGCCACGGCG TCGGCCAGCA GTGCGCAAAC CGGCGCGACG GCGACGACGT CGACCAGCGC GCAAAACGGC ACGCTGCCGG CGATCACCGT CAACGCGGCC TCGGCAGGTG ACGGCACGGT CGGGCTCGTC GCGAAGCGCA GCACGACCGG CACCAAGACC GACACGCCGC TCAACGAGAT CCCGCAGACG ATCAACGTCG TCACCGCGCA GCAGATCGAG ATGACCGGCG CCACCGACGT GAACGCGGCG CTGCGCTACG TGCCGGGCTT CTCGTCGTAC GGGTCGGACA ACCGCTCCGA CTGGTACGCG GCGCTGCGCG GCTTCACGCC GACCGCCTAC GTGAACGGGC TGCAGGTGCC GAACACGATC AACCTCGCGA GCTGGCGCGT CGATCCGTAC ATGATCGACA GCATCAGCGT GCTGCGCGGG CCGACCTCGG TGCTGTACGG CGCGGGCGAT CCGGGCGCGA TCATCGACGT GCACACCAAG CTCGCCGACG GCGAGCGCGT GCGCGAAGCA GGCGTGCAGA TCGGCAACTA CGCGCGCAAG CAGTTCATGA TCGACGTCGG CGACAAGCTC GACCCGGACG GCAAGTATGC GTACCGGTTC GTCGGCGTCG CGCGCGACGG CAACGCGCTG ACGGGCCCGA ACAACGACCA GCGCGTCGCG CTCGCGCCGT CGTTCCGCTG GCGCCCGGAC GCGGATACGT CGCTGACGCT GTCCGCGACC TACCTGCAGG ACTGGGGCGA CATCTCGTCG AACTTCCTGC CCGCGCAAGG CACGGTGCTG CCGAACCCGA ACGGCCAGAT CAACAAGGAC ATCTACGAAG GCGACGGCAA CTTCAACTAC TACCGCAAGA AGCAGTGGTC GGTCGGTTAC CAGTTCGAGC GCAACCTGAC GCCGGCCTGG ACGTTCCGCC AGAACACGCG GCTGATGCAC CTGTCGCTCG ACAACGGCTC GGTGTTCGGC AACGGCTTCG TCGAAGGCAG CACGACCGAC GTGTCGCGCT GGGCCGGCGT GTTCCAGATG AACTACAGCC GCTTCGACAT CGACAACAAC CTGGAGGGCC GCTTCGCGAC GGGCCCGTTG CAGCACACGC TGCTGCTCGG CTTCCAGTAC AACCGCCAGA CCGCGACCGA CAGCGAATGG CTCGCCGCCG CGCCGCCGCT GAACATCTAC AACCCGGTGT ACCAGCCCGT CACGACGGCG GTGTTCACGC CCGACGCGAC GATCCGCACC AACACGTACA CGACGATCAA CACGTTCGGC CTGTACGCGC AGGACCAGAT CAAGTGGAAC CGCTGGACGC TGACGCTCGG CGGCCGCGAG GACTGGGTCA ACATGCGGAT GGACGACCGC GCGGCCGGCA CGTCGACGAA GGCGGACGTC ACGGCGTTCA CCGGCCGCGT CGGCCTCACG TACCAGGGCG ACTACGGGCT GTCGCCGTAC GTCAGCTACG CGACGTCGTT CAATCCGCTG ATCGGCGTGA ACCTGGTCGG CGGCGGGCTG CCGCAGCCGA CGCGCGGCAA GCAGATCGAA GCCGGCCTGC GCTGGCAGCC GCCCGGCAAG AACCTGATGC TGAACGCGGC GATCTACCAG ATCAACCAGA CCAACGTGCT CACGTCGGCG CTGCCGAGCC AGGACCCGAC CGGCACGAAG TCGGTGCAGA CGGGCGAAGT GCGCTCGCGC GGGATCGAGC TGAGCGCGAC CGGCAAGGTC ACGCGAAACC TGTCGGTGAT CGCGTCGTAC GTCTATCAGG ACGTGAAGAA CGTGCAGGCC AACGACGTCT CGCTGAACAA CTGGCCGGTC GACATTCCGC GTCCGCGCCA GATGGCGTCG CTGTGGACCG ACTGGACCTG GTACACGGGG CCGCTCGCCG GCTTCGGCCT CGGCGGCGGC ATTCGCTACC AGAGCGCGTC GGCCGGTGCG GCCGACAACT CGCTGACGGT ATCGAGCGTC ACGCTGTTCG ACGCGGGCCT GCATTACGAC GTGCGTAACT GGCGCTTCGC CGTGAACGGG ACGAACCTGT TCAACCGCCA TTACATCAGC GGTTGCCAGT CGAACAACGT GTGCATTTTC GGGACCGACC GCACCGTGAT CGCGACCGCG AAATACAACT GGTGA
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Protein sequence | MKKVEQKKME WATGTRLRAI AAAASVAFGT AAAGHAYAQT APAVNAGATA SASSAQTGAT ATTSTSAQNG TLPAITVNAA SAGDGTVGLV AKRSTTGTKT DTPLNEIPQT INVVTAQQIE MTGATDVNAA LRYVPGFSSY GSDNRSDWYA ALRGFTPTAY VNGLQVPNTI NLASWRVDPY MIDSISVLRG PTSVLYGAGD PGAIIDVHTK LADGERVREA GVQIGNYARK QFMIDVGDKL DPDGKYAYRF VGVARDGNAL TGPNNDQRVA LAPSFRWRPD ADTSLTLSAT YLQDWGDISS NFLPAQGTVL PNPNGQINKD IYEGDGNFNY YRKKQWSVGY QFERNLTPAW TFRQNTRLMH LSLDNGSVFG NGFVEGSTTD VSRWAGVFQM NYSRFDIDNN LEGRFATGPL QHTLLLGFQY NRQTATDSEW LAAAPPLNIY NPVYQPVTTA VFTPDATIRT NTYTTINTFG LYAQDQIKWN RWTLTLGGRE DWVNMRMDDR AAGTSTKADV TAFTGRVGLT YQGDYGLSPY VSYATSFNPL IGVNLVGGGL PQPTRGKQIE AGLRWQPPGK NLMLNAAIYQ INQTNVLTSA LPSQDPTGTK SVQTGEVRSR GIELSATGKV TRNLSVIASY VYQDVKNVQA NDVSLNNWPV DIPRPRQMAS LWTDWTWYTG PLAGFGLGGG IRYQSASAGA ADNSLTVSSV TLFDAGLHYD VRNWRFAVNG TNLFNRHYIS GCQSNNVCIF GTDRTVIATA KYNW
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