Gene Bcen_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1158 
Symbol 
ID4093384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1260328 
End bp1261353 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID638014434 
Productperiplasmic binding protein 
Protein accessionYP_621038 
Protein GI107022711 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.360135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCACG CCGGCCGCCG GCACGCGCTC GGTGCACTCG CGGCAGCGCT TGGCGCCGCG 
TGCTGCGGCG CGTTTTCCGC ATCGGCGGCG GCCGCCTCCG TGGCCGGGGG CGCGGGCGGT 
TCGCAACGCG CCGTGTCGCT GGCCGGCAAT CCCGTCGTGT CGCAGGCCAG CGCGAAGATG 
CCCGTGCGGC CGCAGCGCGT GGTCGCGCTC GACTTCATGT TCGCGGAAAG CGTGATCGCG 
CTCGACCTCG TGCCGGTCGG GATGGCCGAT ACGGCGTTCT ACCCAGGCTG GCTCGGTTAT 
CGGAGCGAGC AGCTCGCGCA CGTGACCGAC ATCGGCTCGC GGCAGGAGCC AGGGCTCGAG 
GCGATCGCGG CGGTCAAGCC GGATCTCATC ATCGGCGTCG GTTTCCGGCA CGCGCCGATC 
TTCGACGCAC TCGACCGGAT CGCGCCGACG ATCCTGTTCC AGTTCAGCCC GAACGTGTCG 
GAAGACGGCG TGCCGGTCAC GCAGCTCGAC TGGATGCGGC AGATTTTCCG GACGATCGGC 
GCGGTGACGG GGCGCGACGC GCGCGCGCAG GCGGTCGAAG CACAACTCGA CGCCGGCATC 
GCGCGCAACG CGACGCGGCT CGCGGCCGCG GGCCGCCACG GCGAGCGCGT CGCGCTGCTG 
CAGGATCTCG GCTTGCCCGA TCGTTACTGG GCCTATACGG GCAACAGCAC GTCGGCGGGC 
CTCGCGCGAG CGCTCGGGCT CGAGCCGTGG CCGAAGAAGC CGACGCGGGA AGGCACGCTG 
TACGTGACGT CGGCCGATCT GCTGCGGCAG CGCGACCTCG CCGTGCTGTT CGTGACCGCG 
TCGGGGATGG ACGTGCCGTT GTCGGCGAAA CTCGATTCGC CGGTGTGGCG CTTCGTGCCC 
GCACTGAAAG ATCACCGGAT CGCGCTGATC GAGCGCAACA TCTGGGGGTT CGGCGGGCCG 
ATGTCGGCGC TGAAGCTGGC CGACGTGATG ACCGACACGA TGTTGAAGCT GCCGGCCGTG 
CGTTGA
 
Protein sequence
MTHAGRRHAL GALAAALGAA CCGAFSASAA AASVAGGAGG SQRAVSLAGN PVVSQASAKM 
PVRPQRVVAL DFMFAESVIA LDLVPVGMAD TAFYPGWLGY RSEQLAHVTD IGSRQEPGLE 
AIAAVKPDLI IGVGFRHAPI FDALDRIAPT ILFQFSPNVS EDGVPVTQLD WMRQIFRTIG 
AVTGRDARAQ AVEAQLDAGI ARNATRLAAA GRHGERVALL QDLGLPDRYW AYTGNSTSAG 
LARALGLEPW PKKPTREGTL YVTSADLLRQ RDLAVLFVTA SGMDVPLSAK LDSPVWRFVP 
ALKDHRIALI ERNIWGFGGP MSALKLADVM TDTMLKLPAV R