Gene Bcen_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1065 
Symbol 
ID4092168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1165128 
End bp1166117 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID638014338 
ProductABC transporter, substrate-binding protein, aliphatic sulphonates 
Protein accessionYP_620945 
Protein GI107022618 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000288934 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGA TGAACCGCCG CGCATTCGCG CGCGCGATGC TGGCCGCGGG CCTCGCTGCC 
GCCGGTGTCC GCGCGCACGC CGAGAACGCG CCGGCCACGC TGCGCATCGG TTACCAGAAG
TCGTCGACGC TGATCACGCT GCTCAAGACG CGCGGCACAC TCGAGCAGGC GCTGACGCCG
CTCGGCCTGC GCGTGTCATG GCATGAATTC GCGAGCGGAT TGCCACTGAC CGAAGCGCTC
AACGTCGGCG CCGTCGACTT CAGCGCGGAC GTGGCCGATA CGGTGCCGGT CTTCGCGCAG
GCCGCGCATG CGCGTTTCGT GTACGTCGCG CAGGAGGCAC CTTCGCCGAA GGCGCAGGCG
ATCGTCGTCA AGCAGGACAG CGCGCTGCGC ACGCTCGCCG ATCTCAACGG CCGGCGTATC
GCGGTCACGA AGGCGGCCGG TAGCCACTAC CTGCTGCTTG CCGCGCTCGC CCGCGCGAAG
CTCGCGCCCG CCGACGTGGC GATCCATTAC CTGACACCCG CGGACGGCCG CGCCGCGTTC
GAGCGCGGCA GCGTCGACGC ATGGATCACG TGGGATCCGT ATGTCGCGTC GGTCGACCGG
AATCCCGACG TACGGATTCT GGCCGACGGC GACGGACTCG CGTCGTACCA ACGCTACTAC
CTCGCGTCGA GCAGTTTCGC CGCCGCGCGC CCCGATGTCA TCCAGATCCT GTTCGACCAA
CTGTCGCAGG CCGGCGCTTG GCTACGCGAC CATCCGCAGG AGGCCGCGAA CACGCTCGCG
CCGATCTGGG GGCTCGATGC CGCGACGATC GCACGTGCGA ATGCGCGACG CAGCTATCTC
GTCCGCGCGG TGGTCACGCA AAACTTCGGT GAACAGCAGA AGATCGCCGA CACGTTCCTT
GCGGCCGGGC TGCTGCCCGC CCGCGTCGAT ACGAGCCAGG CGCAGCGCTG GAATTTCACG
ACGAAGCGCG CGGAGCCGGT TGGCGCGTGA
 
Protein sequence
MTSMNRRAFA RAMLAAGLAA AGVRAHAENA PATLRIGYQK SSTLITLLKT RGTLEQALTP 
LGLRVSWHEF ASGLPLTEAL NVGAVDFSAD VADTVPVFAQ AAHARFVYVA QEAPSPKAQA
IVVKQDSALR TLADLNGRRI AVTKAAGSHY LLLAALARAK LAPADVAIHY LTPADGRAAF
ERGSVDAWIT WDPYVASVDR NPDVRILADG DGLASYQRYY LASSSFAAAR PDVIQILFDQ
LSQAGAWLRD HPQEAANTLA PIWGLDAATI ARANARRSYL VRAVVTQNFG EQQKIADTFL
AAGLLPARVD TSQAQRWNFT TKRAEPVGA