Gene Bcen_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1062 
Symbol 
ID4092163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1160265 
End bp1161302 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID638014333 
Productinner-membrane translocator 
Protein accessionYP_620942 
Protein GI107022615 
COG category[R] General function prediction only 
COG ID[COG4158] Predicted ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.379015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACC CGACCAAGCA GCGGAACCTC GCTTCCGCGA CCGCCCATCC GGTCGCCAAC 
CGCACACCCC TGATGCGCGG CGCCGATCAT CGCGCCCGCA TGCAATCGCT GATCCGCACG
GCCGGCATGC TGCCGGTGCT GCTGGTCCTG TGCGTCGGCT TCGGCTTCCT GACCGATGGC
TTCTTCACGC TGCAGAACCT GTCGATCGTC ACGCAGCAGG CATCGATCAA CATCGTGCTC
GCCGCCGGCA TGACGTTCGT GATCCTGACG GGCGGCATCG ACCTGTCGGT CGGCTCGGTG
CTCGCCGCCG CGGCCGTCGC GGCGCTCATC GCGTCGACCA TTCCCGGCTG GGGCTGGCTC
GGCGTGCCGT TCGCGCTCGT CGTCGGCCTC GTGTTCGGCG CGATCAACGG CGGGCTGATC
TCGTTCCTGC GCCTGCCGCC GTTCATCGTC ACGCTCGGCG CAATGACTGC CGTGCGCGGC
GTCGCACGCC TGATCGGCAA CGACACGACC GTGTTCAACC CGCAACTGCC GTTCGCGTTC
ATCGGCAACG GCTCGATCCT CGGCGTGCCG TGGCTCGTCG TGATCGCGTG CGCGGTGATC
GCGATCTCGT GGTTCATCCT GCGCCGCACG GTGCTCGGGA TGCGGATCTA TTCGGTCGGC
GGCAACCCGG AAGCCGCGCG TCTGTCGGGC ATCAACGTAC GGGCGATCCA GATGTTCGTG
TATGCGGCGT CGGGCCTGCT CGCCGGCCTC GGCGCGGTGA TGTCGGCCGC ACGCCTGTAT
GCGGCCAACG GCCTGCAGCT CGGCCAGTCG TACGAGCTCG ACGCGATCGC CGCGGTGATC
CTCGGCGGCA CGAGCTTCGT CGGCGGCGTC GGCTCGATCG TCGGCACGCT GATCGGCGCG
CTGATCATCG CGGTGCTGAC CAACGGGCTC GTGCTGCTCG GCGTGTCCGA TATCTGGCAA
TACATCATCA AGGGGCTGGT GATCATCGGC GCGGTCGCGC TCGACCGCTA TCGCCAGCGC
GACTCGGCCC GTACCTGA
 
Protein sequence
MINPTKQRNL ASATAHPVAN RTPLMRGADH RARMQSLIRT AGMLPVLLVL CVGFGFLTDG 
FFTLQNLSIV TQQASINIVL AAGMTFVILT GGIDLSVGSV LAAAAVAALI ASTIPGWGWL
GVPFALVVGL VFGAINGGLI SFLRLPPFIV TLGAMTAVRG VARLIGNDTT VFNPQLPFAF
IGNGSILGVP WLVVIACAVI AISWFILRRT VLGMRIYSVG GNPEAARLSG INVRAIQMFV
YAASGLLAGL GAVMSAARLY AANGLQLGQS YELDAIAAVI LGGTSFVGGV GSIVGTLIGA
LIIAVLTNGL VLLGVSDIWQ YIIKGLVIIG AVALDRYRQR DSART