Gene Bcen_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1061 
Symbol 
ID4092162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1159234 
End bp1160178 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content66% 
IMG OID638014332 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_620941 
Protein GI107022614 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.331503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGC ACACCGCCGC CCTGACCGCC GTCGCCTGCG CACTCGCCTT CGGCGCTGCC 
GCCGCCCAGG CAGCCGACAA GCCGCTGAAA TCGATCGGCG TCACGGTCGG CTCGCTCGGC 
AACCCGTACT TCGTCACGAT CGTGAAAGGC GCCGAAGCGC GCGCGAAGCA GCTCAACCCG 
AACGCGAAAG TCACGGCCGT CTCGGCCGAC TACGACCTGA ACAAGCAGTT CACGCAGATC 
GACAACTTCA TTTCCGCGCA CGTCGACATG ATCCTGCTCA ACGCGACCGA CCCGAAGGCG 
ATCGAGCCGG CGGTGAAAAA GGCGCAGGCG GCCGGCATCA CGGTCGTCGC GGTGGACGTC 
GCGGCGGCCG GCGCGAACGC GACCGTGCAG ACCAACAACG TGAAGGCCGG CGAACTCGCG 
TGCGACTACC TCGCGAAGAA GCTGAACGGC AAGGGCAACG TGATCATCGA GAACGGCCCG 
CAGGTGTCGG CCGTGATCGA TCGCGTGAAC GGCTGCAAGG CCGTGCTCGC GAAAAACGCC 
GGCATCAAGC TGCTGTCGAG CGACCAGGAC GGCAAGGGCT CCCGCGAAGG CGGGATGAAC 
GCGATGCAGG GCTACCTGAC GCGCTTTCCG AAGCTCGACG GCGTGTTCAC GATCAACGAC 
CCGCAGGCGA TCGGCAGCGA TCTCGCGGCG AAACAGCTGA ACCGCCCGAA CATCGTGATC 
ACGTCGGTCG ACGGCGCGCC CGACATCGAG GTCGCACTCA AGTCGAACAC GCTCGTGCAA 
GCGTCGTCGA GCCAGGACCC GTGGGCGATG GCCCAGCAGG CCGTCAACGT CGGCTACGGG 
ATCATGAACG GCCAGAAGCC GGCCAATCCG ATGATCCTGA TCGAGCCGAC GCTGATCACG 
CGCGACAACG TGAAGACCTA CAAGGGCTGG AGCTCCCCGC GCTGA
 
Protein sequence
MFKHTAALTA VACALAFGAA AAQAADKPLK SIGVTVGSLG NPYFVTIVKG AEARAKQLNP 
NAKVTAVSAD YDLNKQFTQI DNFISAHVDM ILLNATDPKA IEPAVKKAQA AGITVVAVDV 
AAAGANATVQ TNNVKAGELA CDYLAKKLNG KGNVIIENGP QVSAVIDRVN GCKAVLAKNA 
GIKLLSSDQD GKGSREGGMN AMQGYLTRFP KLDGVFTIND PQAIGSDLAA KQLNRPNIVI 
TSVDGAPDIE VALKSNTLVQ ASSSQDPWAM AQQAVNVGYG IMNGQKPANP MILIEPTLIT 
RDNVKTYKGW SSPR