Gene Bcen_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1039 
Symbol 
ID4092269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1135782 
End bp1136276 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID638014310 
ProductTadE-like 
Protein accessionYP_620919 
Protein GI107022592 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000150805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCG TTCGTCCGGC ATCCGGCATG CGGCGTCGCC AGCGCGGCGC GACGGCGATC 
GAGTTTGCGA TGGTGCTCCC CGTGTTCTTC CTGATCCTGT ACGCGATCAT CACGTACGGG
ATGATCTTCG CGGCCCAGCA AAACCTGACG CTTGCCGCCA CGGAAGGCGC TCGCGCCGCG
TTGAACTATC AGCAGGTCGG CGCGGCCGGG TCGGTGCAGG CCGCGCAGCA AGCCGCGCTG
GCGGCGCGGG CGCAGGCAGC ATGCACGGCC GCGACGAACC TGACCACATG GCTGAAAGGG
TCGACATGCT CGCCCACGCA GCAAGGCAGC TGTTCGTACG ACCCGACGAT GCTGTGCGTG
CAGATCACGC TGACTTATCC CTACTCGCAG AGCCCGCTGA TTCCACCGTT TCCGCTGCTC
GGTTCGCTGT TGCCGGTGCC GTCGACACTC ACCGGAACCG CGATGGTGCA GATCAGCCCG
GTCAACATCA TATAG
 
Protein sequence
MTAVRPASGM RRRQRGATAI EFAMVLPVFF LILYAIITYG MIFAAQQNLT LAATEGARAA 
LNYQQVGAAG SVQAAQQAAL AARAQAACTA ATNLTTWLKG STCSPTQQGS CSYDPTMLCV
QITLTYPYSQ SPLIPPFPLL GSLLPVPSTL TGTAMVQISP VNII