Gene Bcen_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1030 
Symbol 
ID4092260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1125450 
End bp1126880 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID638014301 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_620910 
Protein GI107022583 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.784148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGG AATTTGACGT CGTCGTGATC GGCGCCGGCC CTGGCGGCTA CATCGCCGCG 
ATTCGCGCCG CGCAGCTCGG CAAGACCGTT GCCTGTATCG AGAAGTGGAA GAACCCGGCC
GGCGCGCTGA AGCTCGGCGG CACCTGCCTG AACGTCGGTT GCATCCCGTC GAAGGCGCTG
CTCGCGTCGT CGGAAGAGTT CGAGAACACG TCGCACCACC TGGCCGACCA CGGCATCACG
GTCGACGGCG TGAAGATCGA CGTCGCGAAG ATGCTCGGCC GCAAGGATGC GATCGTCGAG
AAGATGACGA GCGGGATCGA GTTCCTGTTC AAGAAGAACA AGATCACCTG GCTGAAGGGC
CATGGCAAGT TCACCGGCAA GACCGACGCC GGCGTGCAGA TCGAAGTGAG CGGCGAGGGT
GAAGCCGAAG TCGTCACCGC GAAGAACGTG ATCATCGCGA CGGGCTCGAA GGCGCGTCAC
CTGCCGAACA TCCCGGTCGA CAACAAGATC GTGTCGGACA ACGAAGGTGC GCTGACGTTC
GACTCGGTGC CGAAGAAGCT CGCCGTGATC GGCGCGGGCG TGATCGGCCT CGAGCTCGGC
TCGGTGTGGC GTCGCCTCGG TGCCGACGTG ACGGTGCTCG AAGCGCTGCC GGCGTTCCTC
GGCGCAGCCG ACGAAGCGCT CGCGAAGGAA GCGGCCAAGC TGTTCAAGAA GCAGGGCCTC
GACATCCATC TCGGCGTGAA GATCGGCGAC GTGAAGACGA CCGCCGACGG TGTGTCGATC
GTCTACACGG ACAAGGACGG CAACGCGCAG ACGCTCGACG CCGACCGCCT GATCGTGTCG
GTCGGCCGCC TGCCGAACAC CGACAACCTC GGCCTCGAGG CGATCGGCCT GAAGGCGAAC
GAGCGTGGTT TCATCGACGT GGACGACCAC TGCCGCACGG CGGTGCCGAA CGTGTACGCG
ATCGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CAGAAGACGA AGGCGTGCTG
GTCGCGGAAG TGATCGACGG CCAGAAGCCG CACATCGACT ACAACTGCAT TCCGTGGGTG
ATCTACACGT ACCCGGAAAT CGCATGGGTC GGCAAGACGG AGCAGCAGCT GAAGGCGGAA
GGCCGCGAGA TCAAGACGGG CAAGTTCCCG TTCTCGATCA ACGGCCGCGC GCTCGGCATG
AACGCGCCGG ACGGCTTCGT GAAGATGATC GCGGATGCGA AGACCGACGA GCTGCTCGGC
GTGCACGTGA TCGCCGCGAA CGCGTCGGAC CTGATCGCGG AAGCCGTGGT CGCGATGGAA
TTCAAGGCGG CGTCGGAAGA CATCGCCCGC ATCTGCCATC CGCACCCGTC GATGTCGGAA
GTGATGCGCG AAGCGGCGCT CGCGGTCGAC AAGCGCTCGC TGAACAGCTG A
 
Protein sequence
MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNPA GALKLGGTCL NVGCIPSKAL 
LASSEEFENT SHHLADHGIT VDGVKIDVAK MLGRKDAIVE KMTSGIEFLF KKNKITWLKG
HGKFTGKTDA GVQIEVSGEG EAEVVTAKNV IIATGSKARH LPNIPVDNKI VSDNEGALTF
DSVPKKLAVI GAGVIGLELG SVWRRLGADV TVLEALPAFL GAADEALAKE AAKLFKKQGL
DIHLGVKIGD VKTTADGVSI VYTDKDGNAQ TLDADRLIVS VGRLPNTDNL GLEAIGLKAN
ERGFIDVDDH CRTAVPNVYA IGDVVRGPML AHKAEDEGVL VAEVIDGQKP HIDYNCIPWV
IYTYPEIAWV GKTEQQLKAE GREIKTGKFP FSINGRALGM NAPDGFVKMI ADAKTDELLG
VHVIAANASD LIAEAVVAME FKAASEDIAR ICHPHPSMSE VMREAALAVD KRSLNS