Gene Bcen_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1004 
Symbol 
ID4093298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1095781 
End bp1096989 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID638014277 
Productuncharacterized lipoprotein-like 
Protein accessionYP_620886 
Protein GI107022559 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.460446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC TTCGTCTTAC CATGCGGTTC GCTGCAGTGC TCGCCACCGG CGCGCTCGTC 
GCCGGTTGCG GTACGTCGTC GCCCACGAAA GTGGACTACA AGAGCGATTC GAAATCGAAG
GAAGCGTCGC TCGCAGTGCC GCCCAACATG CTCGACGAGA CGGCCGATCA GCGTTCGCTG
CCGCCCCAGG GCGGCGCGAC TTCCCTGTCC GCGCTCCAGC AGGTCCAGCA GGCCGCGCCT
GCGCTGGACA CCGTCGCGCC GGCCGTGGCC GGCATGCATA TCCAGCGCGA CGGCACCGAA
AGTTGGCTCG TGATCGACGG CAAGCAGCCC GCCGCGATCT GGCCGCAGGT GCGCCGCTTC
TGGCAGGAGC AGGGCTTCCT GCTCGTCGTC GACCAGCGCG ACAAGGGCGT GATGGAAACC
GACTGGAACG AAACCCATCC GCAGATCAAC GACGGCCTGA TCCGCAGCGT GATCTCGAAG
GCGATGGGCA ATTCGTACGT GACGGCAGAG CGCAACAAGT ACCGCACGCG TCTCGATTCG
GCGCCGAACG GCGGCACCTA CGTGTTCATC AGCCAGAAGG GCATGCGCGA GGCGATCACC
GGTGCGAACA ACGATTCGAG CAAGTGGGAA CCGAAGCCGA ACGATCCGGC GCTCGAGACG
GAATACCTGA AGCGGCTGAT GGCCGTGCTC GCGCAGAACG AGCAGCGCGC GAAGAACGGC
GAGCCGCCGA TCGCGAACAT CAAGGACAAC GCGGTACCGA AGGACAAGAA GGCCGATGGC
GACGCGTCGT CGAAGGCTGC CGCGGCGATC GCTGCCCAGA ACGTCTCGCG CACGTCGGCG
CAAGGCAATG ACGCGGCTGA AGCGTCCGTG CCGTCCGAAG TCACGCTCGG CGAGCCGTAC
GACCGGTCGT GGCTGCACGT CGGTCTCGCG CTCGATCGCG CGAACTTCAC GGTCGACGAT
CGCGATCGCT CGAAGGGTCT GTACTTCGTG CGTTACGTCG ATCCGAAGGA TCTGAGCGCG
GCCGAGCAGG GCTTCTGGAG CCAGCTGTTC CACGGCAAGA AGGAAAAGCA GGCGAAGCAG
TATCGCGTCA ACGTGAAGGC GCTCACGGCC GATCAGACGC GTGTCGCGGT CGTCGACGAT
GCGGGCGCGA TCGATACGTC GTCGCCGGCT CGCCAGATCA TGGGGTTGCT TGTGAATCAG
CTCCGCTGA
 
Protein sequence
MTDLRLTMRF AAVLATGALV AGCGTSSPTK VDYKSDSKSK EASLAVPPNM LDETADQRSL 
PPQGGATSLS ALQQVQQAAP ALDTVAPAVA GMHIQRDGTE SWLVIDGKQP AAIWPQVRRF
WQEQGFLLVV DQRDKGVMET DWNETHPQIN DGLIRSVISK AMGNSYVTAE RNKYRTRLDS
APNGGTYVFI SQKGMREAIT GANNDSSKWE PKPNDPALET EYLKRLMAVL AQNEQRAKNG
EPPIANIKDN AVPKDKKADG DASSKAAAAI AAQNVSRTSA QGNDAAEASV PSEVTLGEPY
DRSWLHVGLA LDRANFTVDD RDRSKGLYFV RYVDPKDLSA AEQGFWSQLF HGKKEKQAKQ
YRVNVKALTA DQTRVAVVDD AGAIDTSSPA RQIMGLLVNQ LR