Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0993 |
Symbol | thrS |
ID | 4092150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1084143 |
End bp | 1086050 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638014265 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_620875 |
Protein GI | 162218055 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.31786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCGA TACGCTTGCC TGACGGCTCA GTTCGACAAT ACGAGCATCC GGTGACAGTT GCCGAGGTTG CGGCCTCGAT CGGTCCCGGC CTTGCGAAGG CTGCGCTTGG TGGCAAGCTC GATGGCGAGC TCGTTGATAC GTCGACGGTG ATCGACCGCG ACGCGTCGCT CGCGATCGTC ACGGACAAGG ATGCCGACGG CCTCGACATC ATCCGCCACT CGACCGCCCA CTTGCTCGCG TATGCGGTGA AGGAGCTGTA TCCGGACGCG CAGGTGACGA TCGGCCCGGT GATCGACAAC GGTTTCTATT ACGACTTCTC GTACAACCGC CCGTTTACGC CGGAAGATCT GGAAAAGATC GAAAAGCGCA TGCAGGAACT CGCGAAGAAG GACGAGCCGG TCACGCGCCG TGTCGTGTCG CGTGACGAAG CGGCCGGTTA CTTCCGCAGC ATCGGCGAGA AGTACAAGGC GGAGATCATC GAATCGATTC CGCAAAGCGA CGAAATCAAG CTGTACTCGC ACGGCGGCTT CACCGATCTG TGCCGCGGCC CGCACGTGCC GTCCACCGGC AAGCTGAAGG TCTTCAAGCT GATGAAGGTC GCGGGTGCGT ACTGGCGCGG CGATTCGAAG AACGAGCAGC TGCAGCGTAT CTACGGCACG GCCTGGACGA AGAAGGAAGA CCAGGATCAG TACCTGCACA TGCTCGAGGA GGCGGAGAAG CGCGACCACC GCAAGCTGGG CAAGCAGCTC GACCTGTTCC ACATGCAGGA AGAGTCGCCG GGCATGGTGT TCTGGCATCC GAAGGGCTGG GCGCTGTGGC AGCAGGTCGA GCAGTACATG CGCCGCCGCG TCAACGAAGC CGGTTATCTC GAGATCAAGA CGCCGATGAT CATGGACCGC TCGCTGTGGG AAGCGTCGGG CCACTGGCAG AACTATCGCG AGAACATGTT CACGACGGAG TCGGAGAAGC GCGACTACGC GATCAAGCCG ATGAACTGCC CGGGCCACGT CCAGGTGTTC AAGCACGGCC TGCGCTCGTA TCGCGATCTG CCGCTGCGTT ACGCGGAATT CGGCTCGTGC CACCGCAACG AGGCATCGGG CGCGCTGCAC GGCCTGATGC GCGTGCGCGG CTTCGTGCAG GACGATGCGC ACATCTTCTG TACGGAAGAC CAATTCATCT CGGAATCGAT CGCGTTTAAC ACGCTGGCCA TGAGCGTGTA CAAGGACTTC GGTTTCGATC ACATCGACAT CAAGTTGTCG CTGCGTCCCG ACCAGCGTGC GGGTACGGAC GAGACGTGGG ATCGTGCCGA GCAGGGTTTG CGCGATGCAC TGACGGCCTG CGGCCTTACG TGGGAAGAAT TGCCGGGTGA GGGCGCGTTC TACGGTCCGA AGATCGAGTA CCACATCAAG GATGCGCTCG GCCGCTCGTG GCAGTGCGGC ACGCTGCAGC TCGACATGGT GTTGCCGGAG CGCCTGGGGG CCGAGTACGT CGCGGAAGAC AACAGCCGCC GCCGGCCGGT GATGCTGCAC CGCGCGATCG TCGGTTCGAT GGAGCGATTC CTCGGCATTT TGATCGAGCA CCATGCTGGT GCAATGCCGG TTTGGCTCGC GCCGTACCAG GCAATTGTGC TCAATATCGC CGAAAGTCAG GCCGAATATG CGCAGTCTCT GACCCAAACG TTGCAAAAAC AAGGGGTTAG AGTGGCGGCC GATTTGCGCA ACGAGAAGAT TAGCTATAAA ATACGCGAGC ACACGCTGGA AAAGGTGCCT TATCTCCTCG TCGTGGGCGA TAAGGAGCGT GATGCGCAAA CGGTAGCCGT GCGTGCCCGT GGCGGCGTCG ATCTTGGCGT AATGCCGGTC GAAGCCTTCG TTGAGCGTCT GCAGGAAGAC CTGCGCTCGT TCAAGTAA
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Protein sequence | MVSIRLPDGS VRQYEHPVTV AEVAASIGPG LAKAALGGKL DGELVDTSTV IDRDASLAIV TDKDADGLDI IRHSTAHLLA YAVKELYPDA QVTIGPVIDN GFYYDFSYNR PFTPEDLEKI EKRMQELAKK DEPVTRRVVS RDEAAGYFRS IGEKYKAEII ESIPQSDEIK LYSHGGFTDL CRGPHVPSTG KLKVFKLMKV AGAYWRGDSK NEQLQRIYGT AWTKKEDQDQ YLHMLEEAEK RDHRKLGKQL DLFHMQEESP GMVFWHPKGW ALWQQVEQYM RRRVNEAGYL EIKTPMIMDR SLWEASGHWQ NYRENMFTTE SEKRDYAIKP MNCPGHVQVF KHGLRSYRDL PLRYAEFGSC HRNEASGALH GLMRVRGFVQ DDAHIFCTED QFISESIAFN TLAMSVYKDF GFDHIDIKLS LRPDQRAGTD ETWDRAEQGL RDALTACGLT WEELPGEGAF YGPKIEYHIK DALGRSWQCG TLQLDMVLPE RLGAEYVAED NSRRRPVMLH RAIVGSMERF LGILIEHHAG AMPVWLAPYQ AIVLNIAESQ AEYAQSLTQT LQKQGVRVAA DLRNEKISYK IREHTLEKVP YLLVVGDKER DAQTVAVRAR GGVDLGVMPV EAFVERLQED LRSFK
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