| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0988 |
|---|
| Symbol | |
|---|
| ID | 4092144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1079068 |
|---|
| End bp | 1079976 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638014259 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_620870 |
|---|
| Protein GI | 107022543 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.29091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA TCGACGATTT CCCCGCGCTC GATACGTTCG CGCGGATCGT GTCGGCCGGC
AGCCTGTCGG CGGCGGCGCG CGAGCTCGAC CTGTCGTTGT CGGTCGTCAG CAAGCGGCTC
GCGCATCTCG AGTCGCGGCT CGGCGTGCGC CTGCTGCACC GGACGACGCG GCAGCAGACG
CTCACCGACG ACGGCGCGCA GTTTCATGCG CAGGTCCTGC GCATCCTGGC CGAAGTCGAG
CATGCGGAAA CGCTGATGCG CGACCGCCGC GGCACGGTCA GCGGCGTGCT GCGCGTGACG
GCGCCCGGCG AACTCGGCCG CCTGCGAATC GCGCCGCTCG TCGCGGCATT TCAGCAGCGG
CATCCGCAAT TGACCGTGCA GTTGATGCTG ACCGATGCGG TCGTCGATCT GCTCGCAGCC
GACATCGACG TCGCCGTGCG GATCGGCAAT CTTGCCGATT CGACGATGAT CGCGCGCGAG
CTGGCGCCGA ATCACCGCGT GCTGTGCGCG TCGCCGGGCT ATCTCGCGGC GCACGGCTGG
CCGGCCCATC CGGCCGAGCT GCGTGCGCAT CGATGCATCG TGATGGGCGA CCAGCCGCGT
GCCGAATGGC GGTTCGATGG CGCGCAAGGC GGCGTGGCGG TCGAGGTGAC GGCCGCGCTG
CTGACCAACG ACGGCGGCGC GGCGCGCACG CTGGCGCTCG AAGGCGCGGG CATTGCGTTG
AAGTCGATCT GGGACGTCGG CGCCGATCTC GACGCCGGCC GGCTCGTGCG CGTGCTGCCG
GCCTTCGAGG CATCCGCCGC GCCGTTGCAT GCCGTTTATC CCGGCGCTCG CCATGTGCCG
TTGCGGGTGC GGACATTCGT CGATTTCCTG CGCGAGCAGT TGCGGGACGC GTGGCGTCGC
CACGATTGA
|
|---|
| Protein sequence | MTLIDDFPAL DTFARIVSAG SLSAAARELD LSLSVVSKRL AHLESRLGVR LLHRTTRQQT
LTDDGAQFHA QVLRILAEVE HAETLMRDRR GTVSGVLRVT APGELGRLRI APLVAAFQQR
HPQLTVQLML TDAVVDLLAA DIDVAVRIGN LADSTMIARE LAPNHRVLCA SPGYLAAHGW
PAHPAELRAH RCIVMGDQPR AEWRFDGAQG GVAVEVTAAL LTNDGGAART LALEGAGIAL
KSIWDVGADL DAGRLVRVLP AFEASAAPLH AVYPGARHVP LRVRTFVDFL REQLRDAWRR
HD
|
|---|
| |