Gene Bcen_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0808 
Symbol 
ID4091561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp872564 
End bp873781 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID638014078 
Productmajor facilitator transporter 
Protein accessionYP_620691 
Protein GI107022364 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000152405 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCGG TGCAGGTGAG GGTGCTCGCG CTGTTTTCGG TCGGGTATTT CGTGTCGTAC 
GTCTTTCGCG GCGTCAATCT GGGCTTCGCG CCGTTCGTCA CGCATGAGCT CGGGCTGTCG
GCCGCCGATC TCGGCCTGCT CACCAGCCTC TATTTCCTCG GCTTCGCGGG CGCGCAGATC
CCGGCCGGCG TGATGCTCGA CCACTTCGGC CCGCGCCGCG TGACGGCCGG CATGCTGCTG
TTCGCGGCGG CCGGCGCGGC CGTGTTCGGT GCGGCGCATG GCATCGGCAC GATGATGGTC
GGCCGGCTGC TGATCGGCGT CGGCGTATCG GTCTGTCTCG GTGCGGCGTT CAAGGCGCTC
GCGCAGCATT TCCCGGTTGG CCGGCTGCCG CTCGTCAACG GTCTCGTGAT GGCCGTGGGC
GGCCTCGGCG GCGTAATGGT TGGCTCGCCG CTGACCTGGC TGCTCGGCTG GGCGAGCTGG
CGCGCGATCT GTTTCGGCCT CGCGGTGCTG ACCGTGGCCG TCGCTGTGTC GATCGGCTTC
GGGGCGCCCG ACGCGCAGCA GGCGCGTCAC CAGGGCGGCC TCGTCAGCCA GTTCAAGGGC
ACGTGGCACA TCCTGACGAG CCGCGCGTTC TGGAAGATCG CATCGTTCTC CGTCGTCACG
CAGGGCGTGT TCTATGCGAT GCAGTCGCTG TGGGTTGGCC CGTATCTGCG CGACGTCGGC
GGATTCGACG CGCCGCATGC CGCGCGCCTC GTGTCGGTGC TCGGCTTCGC GATGATGGCC
GGCTGCGTCG GCTTCGGCGC GGCGGCACGC GTGCTCGAGC GGCGCGGCGT GTCGGTCTAC
GCGACTTGCG GCATCGGCAT GGCGCTGTTC GTCGCGACGC AGCTCGCGAT CGTCGCGCGC
GTGCCGTTGC CGCCCGCCGT GCTGTGGGCC GCCTACGGGA TGTTCGGCGG CGTGGGCATC
CTGACCTACG CGGTGATGGC CGGCCACTTT CCCGCCCATC TGATCGGGCG CGCGAACACG
ACGCTCACGC TCGTGATCTT CCTGCTGATC TTCGCGTTCC AGATCGGCGT CGGCGCCGTA
CTGTCGCACT GGCCGACGGT CGACGGCCGT TATTCGGCCG CCGCGCACTT CACCGCCTGG
GGCGTGCTGC TCGCGCTGCA GCTCGCGAGC GCGGTCTGGT ACGTCTGGCC CGCGCGCGGC
GCTGGCCAAG CGCACTGA
 
Protein sequence
MSSVQVRVLA LFSVGYFVSY VFRGVNLGFA PFVTHELGLS AADLGLLTSL YFLGFAGAQI 
PAGVMLDHFG PRRVTAGMLL FAAAGAAVFG AAHGIGTMMV GRLLIGVGVS VCLGAAFKAL
AQHFPVGRLP LVNGLVMAVG GLGGVMVGSP LTWLLGWASW RAICFGLAVL TVAVAVSIGF
GAPDAQQARH QGGLVSQFKG TWHILTSRAF WKIASFSVVT QGVFYAMQSL WVGPYLRDVG
GFDAPHAARL VSVLGFAMMA GCVGFGAAAR VLERRGVSVY ATCGIGMALF VATQLAIVAR
VPLPPAVLWA AYGMFGGVGI LTYAVMAGHF PAHLIGRANT TLTLVIFLLI FAFQIGVGAV
LSHWPTVDGR YSAAAHFTAW GVLLALQLAS AVWYVWPARG AGQAH