Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0591 |
Symbol | rimM |
ID | 4092209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 639274 |
End bp | 639951 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638013856 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_620475 |
Protein GI | 107022148 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGTC ACGATTCCGG TAATGCAAGG CGCGGGCGTG CGTCATTCGG CGCATTCGTC CGCAAGCCGG TCGAGCGCGA CTCGGTCGCG AACGCCGGTC AGGCTGCCGA ACAAGGTAGT CCCGAAGCGA CGCAGGCCTG GCCCGACGAT GCCGTCGAGG TCGGAGCGGT GGTCGACGCC TACGGCCTGA AGGGCTGGGT CAAGGTGGCG ACGCATGCCG ATGCCGGTCG CGGCGGCGAC GCGCTGCTCA ACGCGCGTCG CTGGTGGCTG GAGCGCGGTG CGGAGCGGCT TTCCGTCCGC ATCATGCAGT CGAAGACGCG CAGCGACACT GTCGTTGCGC AACCTGCGGG CGTCAGCGAC CGCGATGCTG CGCTGTCCAT GCGCGGTTTT CGCGTGTTCG TGCGCCGGGA AGATTTCCCG GCACTCGCCG CGGACGAATT CTATTGGGTC GACCTGATCG GTCTCGAGGT CGTCAACGAG CAATCGGTGG CGCTCGGGAA GGTGAGCGGG ATGATCGACA ACGGCGTGCA TTCGATCATG CGTGTCGAGT ATCCGGCAAC CGGCAAAGAC GGTCAGCCGA CCACCGACGA GCGGTTGATT CCGTTCGTCG GTGTCTACGT CAAAACGGTG GATCAGGCGG CGCGTCGCAT CGTCGTCGAC TGGGAAGCCG ATTACTGA
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Protein sequence | MAGHDSGNAR RGRASFGAFV RKPVERDSVA NAGQAAEQGS PEATQAWPDD AVEVGAVVDA YGLKGWVKVA THADAGRGGD ALLNARRWWL ERGAERLSVR IMQSKTRSDT VVAQPAGVSD RDAALSMRGF RVFVRREDFP ALAADEFYWV DLIGLEVVNE QSVALGKVSG MIDNGVHSIM RVEYPATGKD GQPTTDERLI PFVGVYVKTV DQAARRIVVD WEADY
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