| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0582 |
|---|
| Symbol | |
|---|
| ID | 4092200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 630815 |
|---|
| End bp | 631609 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638013847 |
|---|
| Product | lipoprotein YaeC |
|---|
| Protein accession | YP_620466 |
|---|
| Protein GI | 107022139 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.462482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAC GCTTCATGCT GAAATTCGCG GCGGCGCTGG GCGCGGCCGC GCTGTTCGCG
GGCGCGCATG CCCAGGCCGA AACCATCAAG GTCGGCGTGA CGGGCGGCCC GCACGCGCAG
ATCATGGAAG TGGTGAAGAA GGTCGCGGCG AAGGACGGCC TGGAGATCCG CATCGTCGAA
TTCTCCGATT ACGTGCAGCC GAACGCCGCG CTCGCGTCGG GCGACCTCGA CGCGAACAGC
TACCAGCACG ATCCGTATCT GCAGGCGCAG GTGAAGGATC GCGGCTACAA GCTGATCAAG
GTTGCCGATA CCGTCACGTT CCCGATGGGC ATCTACTCGA AGCGCGTGAA GTCGCTGGCC
GAACTGAAGC CGGGCGCGCG CGTCGCGGTC CCGAACGATC CGACCAACGG CGGCCGCGCG
CTGCTGTTGC TGCAGAAGCA GGGGCTGCTG AAGCTGCGCG CGGATGCGGG GCTGAAAGCG
ACGCCGCTCG ATATCGTCGA CAATCCGCGC AAGCTGAAGA TCGTCGAACT CGATGCCGCG
CAGATTCCGC GCTCGCTCGG CGACGTCGAC GCGGCCGCGA TCAATACCAA TTACGCGATG
GAAGCGGGGT TGAAACCGAA GCAGGACGCG ATCGCGATCG AGGGCCCGAG CGGCCCGTAC
GCGAACATCC TCGCGATCCG TGAGGCGGAC CGGAACAAGC CGTGGGTCGC CAAGCTGATT
GCGGCATATC ACTCGGCCGA CGTGAAGCAG TTCATCGAAG GCAAGTTCGG CGGCGCGGTC
ATCGCCGCCT GGTAA
|
|---|
| Protein sequence | MQRRFMLKFA AALGAAALFA GAHAQAETIK VGVTGGPHAQ IMEVVKKVAA KDGLEIRIVE
FSDYVQPNAA LASGDLDANS YQHDPYLQAQ VKDRGYKLIK VADTVTFPMG IYSKRVKSLA
ELKPGARVAV PNDPTNGGRA LLLLQKQGLL KLRADAGLKA TPLDIVDNPR KLKIVELDAA
QIPRSLGDVD AAAINTNYAM EAGLKPKQDA IAIEGPSGPY ANILAIREAD RNKPWVAKLI
AAYHSADVKQ FIEGKFGGAV IAAW
|
|---|
| |