| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0568 |
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| Symbol | rpsA |
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| ID | 4093799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 616732 |
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| End bp | 618444 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638013833 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_620452 |
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| Protein GI | 162218058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.742386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC TGCAAACCTC CACCCCGAAT ACCGAATCCT TTGCGGCTCT GTTCGAAGAG
TCGCTGACCC GCCAAGACAT GCGCGCCGGC GAAGTGATTT CCGCCGAAGT CGTGCGCGTC
GACCACAACT TCGTGGTCGT CAATGCAGGC CTGAAGTCCG AGGCTTACAT TCCGATCGAG
GAATTCCTGA ACGATCAGGG CGAGGTTGAG GTGCAGTCGG GCGATTTCGT GTCCGTCGCG
ATCGACGCAC TCGAAAACGG CTATGGCGAC ACGATCCTGT CGCGCGACAA GGCGAAGCGC
CTTGCATCGT GGCTGTCGCT GGAAAAGGCG CTCGACAACA ACGAGCTCGT CACCGGCACG
ATCACCGGCA AGGTGAAGGG CGGCATGACC GTGATGGTCA ACGGCATCCG CGCGTTCCTG
CCGGGTTCGC TGGTCGACAC GCGTCCGGTC AAGGACACGA CCCCGTACGA AGGCAAGACG
CTCGAGTTCC GCGTGATCAA GCTCGATCGC AAGCGTAACA ACGTCGTGCT GTCGCGTCGT
GCAGTGATCG AAGCAACGCA AGGCGAAGAG CGCGCGAAGC TGCTCGAGAC GCTGAAGGAA
GGCGCGATCG TCAACGGCGT GGTCAAGAAC ATCACCGACT ACGGCGCGTT CGTCGACCTC
GGCGGTATCG ACGGCCTGCT GCACATCACC GACATCGCAT GGCGTCGTGT GCGTCACCCG
AGCGAAGTCC TGTCGGTTGG CCAGGAAGTC ACCGCGAAGA TCCTCAAGTT CGACCAAGAG
AAGAACCGCG TCTCGCTGGG CATCAAGCAA CTGGGCGACG ATCCGTGGGA AGGCATCTCG
CGCCGTTACC CGTCGGGCAC GCGCCTGTTC GGCAAGGTCA CGAACATCAC CGACTACGGC
GCATTCGTCG AAGTGGAATC GGGCATCGAA GGCCTCGTCC ACGTGTCGGA AATGGACTGG
ACCAACAAGA ACGTTGCGCC GTCGAAGGTT GTCCAGCTGG GCGACGAAGT CGAAGTCATG
GTCCTCGAGA TCGACGAAGA CCGTCGTCGT ATCAGCCTCG GCATGAAGCA GTGCAAGCCG
AATCCGTGGG ATGACTTCAG CCGCAACTTC AAGAAGGGCG ACAAGATCAC GGGCGCAATC
AAGTCGATCA CCGACTTCGG CGTGTTCATC GGTCTGCCGG GCGGCATCGA CGGCTTGGTC
CACCTGTCGG ACCTGTCGTG GAGCGAAGCC GGCGAAGAAG CCGTTCGCAA GTACAAGAAG
GGCGACGAAG TCGAAGCAAT CGTGCTCGGT ATCGACGTCG AGAAGGAGCG CATTTCGCTC
GGCATCAAGC AGCTCGAAGG CGACCCGTTC AGCAACTACG TTGCAATGAA CGACAAGGGC
TCGATCGTCG ACGGCGTCGT GAAGACGGTC GATGCGAAGG GTGCGGTCGT CACGCTGACG
GGCGACATCG AAGGCTACCT GCGTGCGTCG GAAATCTCGC AGGATCGCGT CGAAGATGCA
CGCAACGTGC TGAAGGAAGG CGACAAGGTC AACGCGATGG TGATCAACAT CGATCGCAAG
TCGCGCGGCA TCAACCTGTC GATCAAGGCG AAGGATTCGG CCGAACAACA GGAAGCGATC
CGCGGCCTGC AGTCGGACTC CAGCGCTGCT GCGACCGGTA CGACCAACCT CGGCGCGCTG
CTGAAGGCGA AGCTCGACGG CCAGAACCAG TAA
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| Protein sequence | MSDLQTSTPN TESFAALFEE SLTRQDMRAG EVISAEVVRV DHNFVVVNAG LKSEAYIPIE
EFLNDQGEVE VQSGDFVSVA IDALENGYGD TILSRDKAKR LASWLSLEKA LDNNELVTGT
ITGKVKGGMT VMVNGIRAFL PGSLVDTRPV KDTTPYEGKT LEFRVIKLDR KRNNVVLSRR
AVIEATQGEE RAKLLETLKE GAIVNGVVKN ITDYGAFVDL GGIDGLLHIT DIAWRRVRHP
SEVLSVGQEV TAKILKFDQE KNRVSLGIKQ LGDDPWEGIS RRYPSGTRLF GKVTNITDYG
AFVEVESGIE GLVHVSEMDW TNKNVAPSKV VQLGDEVEVM VLEIDEDRRR ISLGMKQCKP
NPWDDFSRNF KKGDKITGAI KSITDFGVFI GLPGGIDGLV HLSDLSWSEA GEEAVRKYKK
GDEVEAIVLG IDVEKERISL GIKQLEGDPF SNYVAMNDKG SIVDGVVKTV DAKGAVVTLT
GDIEGYLRAS EISQDRVEDA RNVLKEGDKV NAMVINIDRK SRGINLSIKA KDSAEQQEAI
RGLQSDSSAA ATGTTNLGAL LKAKLDGQNQ
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