Gene Bcen_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0566 
Symbol 
ID4093797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp614585 
End bp615889 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content68% 
IMG OID638013831 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_620450 
Protein GI107022123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACC TCGATCTCGG CCCGTACTCC AGCGCATCGG GCACCGTGCG CCTGCCCGGC 
TCGAAGAGCA TTTCGAACCG CGTGCTGCTG CTCGCGGCGC TCGCCGAAGG CGAAACGACG
ATCACCAACC TGCTCGACTC CGACGACACG CGTGTGATGC TCGACGCACT CGGCAAGCTC
GGCGTGAAGC TCGCGCGCGA TGGCGACACC TGTGTCGTCA CCGGCACGCG CGGCGCGTTC
ACCGCGAAGA CGGCCGACCT GTTCCTCGGC AACGCGGGCA CGGCCGTGCG GCCGCTGACC
GCCGCACTCG CGGTGAACGG CGGCGACTAC CGCGTGCACG GCGTGCCGCG CATGCACGAA
CGGCCGATCG GCGATCTCGT CGATGGCCTG CGCCAGATCG GCGCGCAGAT CGACTACGAG
CTGAGCGAAG GTTACCCGCC GCTGCGGATC AAGCCCGCGA CGATTTCGGT CGATGCGCCG
ATCCGCGTGC GCGGTGACGT GTCGAGCCAG TTCCTCACCG CGCTCCTGAT GACGCTGCCG
CTCGTGAAGG CGAAGGATGG CCAGGCCGTC GTCGAAGTCG ACGGCGAGCT GATCTCGAAA
CCGTACGTCG ACATCACGAT CCGGCTGATG GCGCGCTTCG GCGTGACCGT CGAGCGCGAC
GGCTGGCAGC GCTTCGTGGT GCCGGCCGGC GTCCGCTACC GCTCGCCGGG GCGAATCATG
GTCGAGGGCG ACGCGTCGTC CGCGTCGTAT TTCCTCGCGG CCGGCGCGCT CGGCGGCGGC
CCGCTGCGGG TCGAAGGCGT GGGGCGGGCG AGTATCCAGG GTGACGTCGG TTTCGCGAAT
GCGCTGATGC AGATGGGCGC GAACGTGACG ATGGGCGACG ACTGGATCGA CGTACGCGGC
ATCGGCCACG ATCGCGGCAA GCTCGAGCCG ATCGACATGG ACTTCAACCT GATTCCCGAC
GCGGCGATGA CCATCGCGGT CGCGGCGCTG TTCGCGAACG GCACGAGCAC GCTGCGCAAC
ATCGCGAGCT GGCGCGTGAA GGAGACCGAC CGCATCGCCG CGATGGCGAC CGAGTTGCGC
AAGGTCGGCG CGATTGTCGA GGAAGGCCCC GACTATCTCG TCGTCACGCC GCCGGAAAAG
CTCACGCCGA ACGCGGCGAT CGATACGTAC GACGATCACC GGATGGCGAT GTGCTTCTCG
CTCGTCAGCC TGGGCGGCGT GCCCGTGCGG ATCAACGATC CGAAGTGCGT CGGCAAGACG
TTCCCCGACT ATTTCGACCG CTTCGCCGCG CTCGCCAAGG CCTGA
 
Protein sequence
MDYLDLGPYS SASGTVRLPG SKSISNRVLL LAALAEGETT ITNLLDSDDT RVMLDALGKL 
GVKLARDGDT CVVTGTRGAF TAKTADLFLG NAGTAVRPLT AALAVNGGDY RVHGVPRMHE
RPIGDLVDGL RQIGAQIDYE LSEGYPPLRI KPATISVDAP IRVRGDVSSQ FLTALLMTLP
LVKAKDGQAV VEVDGELISK PYVDITIRLM ARFGVTVERD GWQRFVVPAG VRYRSPGRIM
VEGDASSASY FLAAGALGGG PLRVEGVGRA SIQGDVGFAN ALMQMGANVT MGDDWIDVRG
IGHDRGKLEP IDMDFNLIPD AAMTIAVAAL FANGTSTLRN IASWRVKETD RIAAMATELR
KVGAIVEEGP DYLVVTPPEK LTPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT
FPDYFDRFAA LAKA