Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0566 |
Symbol | |
ID | 4093797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 614585 |
End bp | 615889 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638013831 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_620450 |
Protein GI | 107022123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTACC TCGATCTCGG CCCGTACTCC AGCGCATCGG GCACCGTGCG CCTGCCCGGC TCGAAGAGCA TTTCGAACCG CGTGCTGCTG CTCGCGGCGC TCGCCGAAGG CGAAACGACG ATCACCAACC TGCTCGACTC CGACGACACG CGTGTGATGC TCGACGCACT CGGCAAGCTC GGCGTGAAGC TCGCGCGCGA TGGCGACACC TGTGTCGTCA CCGGCACGCG CGGCGCGTTC ACCGCGAAGA CGGCCGACCT GTTCCTCGGC AACGCGGGCA CGGCCGTGCG GCCGCTGACC GCCGCACTCG CGGTGAACGG CGGCGACTAC CGCGTGCACG GCGTGCCGCG CATGCACGAA CGGCCGATCG GCGATCTCGT CGATGGCCTG CGCCAGATCG GCGCGCAGAT CGACTACGAG CTGAGCGAAG GTTACCCGCC GCTGCGGATC AAGCCCGCGA CGATTTCGGT CGATGCGCCG ATCCGCGTGC GCGGTGACGT GTCGAGCCAG TTCCTCACCG CGCTCCTGAT GACGCTGCCG CTCGTGAAGG CGAAGGATGG CCAGGCCGTC GTCGAAGTCG ACGGCGAGCT GATCTCGAAA CCGTACGTCG ACATCACGAT CCGGCTGATG GCGCGCTTCG GCGTGACCGT CGAGCGCGAC GGCTGGCAGC GCTTCGTGGT GCCGGCCGGC GTCCGCTACC GCTCGCCGGG GCGAATCATG GTCGAGGGCG ACGCGTCGTC CGCGTCGTAT TTCCTCGCGG CCGGCGCGCT CGGCGGCGGC CCGCTGCGGG TCGAAGGCGT GGGGCGGGCG AGTATCCAGG GTGACGTCGG TTTCGCGAAT GCGCTGATGC AGATGGGCGC GAACGTGACG ATGGGCGACG ACTGGATCGA CGTACGCGGC ATCGGCCACG ATCGCGGCAA GCTCGAGCCG ATCGACATGG ACTTCAACCT GATTCCCGAC GCGGCGATGA CCATCGCGGT CGCGGCGCTG TTCGCGAACG GCACGAGCAC GCTGCGCAAC ATCGCGAGCT GGCGCGTGAA GGAGACCGAC CGCATCGCCG CGATGGCGAC CGAGTTGCGC AAGGTCGGCG CGATTGTCGA GGAAGGCCCC GACTATCTCG TCGTCACGCC GCCGGAAAAG CTCACGCCGA ACGCGGCGAT CGATACGTAC GACGATCACC GGATGGCGAT GTGCTTCTCG CTCGTCAGCC TGGGCGGCGT GCCCGTGCGG ATCAACGATC CGAAGTGCGT CGGCAAGACG TTCCCCGACT ATTTCGACCG CTTCGCCGCG CTCGCCAAGG CCTGA
|
Protein sequence | MDYLDLGPYS SASGTVRLPG SKSISNRVLL LAALAEGETT ITNLLDSDDT RVMLDALGKL GVKLARDGDT CVVTGTRGAF TAKTADLFLG NAGTAVRPLT AALAVNGGDY RVHGVPRMHE RPIGDLVDGL RQIGAQIDYE LSEGYPPLRI KPATISVDAP IRVRGDVSSQ FLTALLMTLP LVKAKDGQAV VEVDGELISK PYVDITIRLM ARFGVTVERD GWQRFVVPAG VRYRSPGRIM VEGDASSASY FLAAGALGGG PLRVEGVGRA SIQGDVGFAN ALMQMGANVT MGDDWIDVRG IGHDRGKLEP IDMDFNLIPD AAMTIAVAAL FANGTSTLRN IASWRVKETD RIAAMATELR KVGAIVEEGP DYLVVTPPEK LTPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT FPDYFDRFAA LAKA
|
| |