| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0548 |
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| Symbol | |
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| ID | 4091766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 591570 |
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| End bp | 593036 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638013813 |
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| Product | general substrate transporter |
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| Protein accession | YP_620432 |
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| Protein GI | 107022105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.300835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCCT GGCGTGGCAT GATTCGCGAA TCATGCCGGC GGCGCGTTGT TACGCGCCGT
GCCGCCGGCG GGCAGCGATG CCCGGGCGCG CGGGGCTCAC CCTGCGCGTC GCGCATCGTC
GGATTCATGC GGCGGCGCGG TATTCGCGCC ACCCGAGCTG AGCGAGAAAA TATGTCCACA
GCGTCCCCTG CGATCGCGCA GGAATCGAAA GTCCGCACCG TCTTCCGGGT CGTCAGCGGC
AACTTCCTGG AAATGTACGA CTTCATGGTC TACGGGTATT ACGCGTCGGC CATCGCGAAA
ACGTACTTTC CGAGCGGCAA CGCGTTCGCG TCGCTGATGC TGTCGCTGTC GGTATTCGGC
GCGGGTTTCC TGATGCGCCC GGTCGGTGCG ATCGTGCTCG GCGCGTACAT CGATCATCAC
GGCCGCCGCA AGGGCCTGAT CCTGACGCTC GGGCTGATGG CGATCGGCAC GCTCACCGTG
GCCGCGATCC CGGGCTATGC GACGATCGGC GTGCTCGCGC CGGTGCTCGT GCTGCTCGGC
CGGTTGTTGC AGGGCTTCTC GGCGGGCGTC GAGCTCGGCG GCGTGTCGGT CTACCTGTCG
GAGATCGCGA CGAAGGGCCA CAAGGGGTTC TATACGTCGT GGCAGTCGGG CAGCCAGCAG
GTGGCCGTCG TGTTCGCCGC GTTCGTCGGT GTCGTGCTGA ACCGCGCGCT GCCGGTCGAG
GAAATGACCG CGTGGGGCTG GCGCATTCCG TTCCTGATCG GCTGCCTGAT CGTGCCGTTC
CTGTTCCTGA TCCGCCGGTC GCTGAAGGAG ACCGACGAGT TTCTTGCGAA GCGTCACCGG
CCGACGATGG GCGAGATCAT GCGCTCGATG CTCGACAACT GGGGTGTCGT GGTGGCCGGC
ATGGGGATGG TGATCATGAC GACAGTGTCG TTCTACATGA TTACCGCGTA CACGCCGACC
TTCGGCAAGG AAGTGCTGCA CCTGTCGTCG CTCGACGCGC TCGTCGTGAC CGTTTGCGTC
GGGATCTCGA ATCTCGTGTG GTTGCCGCTG TCCGGCGCGC TGTCCGACCG CATCGGTCGC
CGCCCGGTGC TGATCGCCTT CACCGTGCTG ACGCTGGTGT CGGCTTATCC GGCCGTGCTG
TGGCTCGTCG GCGATCCGTC GTTCCTGCGG CTGCTCGCGG TCGAGCTGTG GCTGTCGTTC
CTGTACGCGT CGTACAACGG CGCGATGGTC GTCGCGCTGA CCGAAGTGAT GCCGGCCGAC
GTGCGTACGG CCGGCTTCTC GCTCGCGTAC AGCCTGGCCA CGACGATCGG CGGCTTCACG
CCGGCGATCT CGACGCTGCT GATCCACCAG ACGGGCAACA AGGCGGCGCC GGGGCTGTGG
CTGAGCGTGG CCGCGATCTG CGGCCTGATC GCGACGCTCG TGCTGTATCG CACGGCCGAT
GCGCGCAACC AGTACAAGTC AGCCTGA
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| Protein sequence | MSAWRGMIRE SCRRRVVTRR AAGGQRCPGA RGSPCASRIV GFMRRRGIRA TRAERENMST
ASPAIAQESK VRTVFRVVSG NFLEMYDFMV YGYYASAIAK TYFPSGNAFA SLMLSLSVFG
AGFLMRPVGA IVLGAYIDHH GRRKGLILTL GLMAIGTLTV AAIPGYATIG VLAPVLVLLG
RLLQGFSAGV ELGGVSVYLS EIATKGHKGF YTSWQSGSQQ VAVVFAAFVG VVLNRALPVE
EMTAWGWRIP FLIGCLIVPF LFLIRRSLKE TDEFLAKRHR PTMGEIMRSM LDNWGVVVAG
MGMVIMTTVS FYMITAYTPT FGKEVLHLSS LDALVVTVCV GISNLVWLPL SGALSDRIGR
RPVLIAFTVL TLVSAYPAVL WLVGDPSFLR LLAVELWLSF LYASYNGAMV VALTEVMPAD
VRTAGFSLAY SLATTIGGFT PAISTLLIHQ TGNKAAPGLW LSVAAICGLI ATLVLYRTAD
ARNQYKSA
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