Gene Bcen_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0516 
Symbol 
ID4093551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp557387 
End bp558601 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID638013778 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_620401 
Protein GI107022074 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGG CCGCGGACAC CGGCGCGCGC GTCGTCGCGA CCTTCACGTC GCCCGGCCAG 
GTGCGTCTCA CGTCGCTGCC GCCGCTCGCG CTGTACGTGC ATTTCCCGTG GTGCGTGCGC
AAGTGCCCGT ACTGCGATTT CAACTCGCAC GAATGGAAAG GCGAACGGTT CCCGGAAGCC
GACTATCTCG ACGCGTTGCG CGCCGACCTC GAGCAGGCGC TGCCGCTCGT GTGGGGCCGA
CAAGTGCATA CCGTGTTCAT CGGCGGCGGC ACGCCGAGCC TGCTGTCGGC GGCCGGCCTC
GACCGGATGC TGTCCGACGT GCGCGCGCTC TTGCCGCTCG ACGCCGATGC CGAGATCACG
CTAGAAGCGA ATCCGGGCAC GTTCGAAGCC GCGAAGTTCG CGCAGTTCCG CGCCAGCGGC
GTGAACCGCC TGTCGGTCGG CATCCAGAGC TTCAACGAAG CGCACCTGAA GGCGCTCGGC
CGGATTCACG ACACCGCGCA GGCGCGCGCG GCCGTCGAGA TCGCCGCGAA GAACTTCGAC
AACTTCAACC TCGACCTGAT GTTCGCATTG CCGAACCAGA CGCTGGACGA ATGCCGCACC
GACATCGAGA CCGCGCTGTC GTTCGCGCCG CCGCACCTGT CGCTGTATCA CCTGACGCTC
GAGCCGAATA CGCTGTTCGC GAAGTTCCCG CCCGTCGTTC CCGACGACGA CGCGTCGGCC
GACATGCAGG AATGGATCCA TGCGCGCACG GCCGAAGCCG GCTACGGGCG CTATGAAGTG
TCCGCATACG CGAAGCCGAA TCATCAGTGC AAGCACAACC TGAATTACTG GCGCTTCGGC
GACTATCTCG GGATCGGCGC GGGCGCCCAT ACGAAGCTGT CGTTCCCGAA CCGGATCCTG
CGGCAGGCGC GCTACAAGCA TCCGGCGACC TTCATCGAGC AGGCGAAGGC CGGCACGGCC
GTGCAGGAAG AGCGTGAAGT CGGCGCGCGC GACCTGCCGT TCGAATTCAT GCTGAACACG
CTGCGGCTCG TCGAGGGCTT CCCCGTGCAC AGCTTCGCGG AACGCACGGG CCTGCCGATG
AGCACGATCG AGCCGGCGCT GAAGGAAGCG GAACGGCGCG GGCTGATCAC GCGCGATTTC
ACGCAGATCG CGCCGACACC GCTCGGCCAG CGTTTCCTCA ACGACCTGCA GGAATTGTTC
CTGCGCGACG ACTGA
 
Protein sequence
MSQAADTGAR VVATFTSPGQ VRLTSLPPLA LYVHFPWCVR KCPYCDFNSH EWKGERFPEA 
DYLDALRADL EQALPLVWGR QVHTVFIGGG TPSLLSAAGL DRMLSDVRAL LPLDADAEIT
LEANPGTFEA AKFAQFRASG VNRLSVGIQS FNEAHLKALG RIHDTAQARA AVEIAAKNFD
NFNLDLMFAL PNQTLDECRT DIETALSFAP PHLSLYHLTL EPNTLFAKFP PVVPDDDASA
DMQEWIHART AEAGYGRYEV SAYAKPNHQC KHNLNYWRFG DYLGIGAGAH TKLSFPNRIL
RQARYKHPAT FIEQAKAGTA VQEEREVGAR DLPFEFMLNT LRLVEGFPVH SFAERTGLPM
STIEPALKEA ERRGLITRDF TQIAPTPLGQ RFLNDLQELF LRDD