| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0485 |
|---|
| Symbol | |
|---|
| ID | 4092634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 525120 |
|---|
| End bp | 526496 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638013745 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_620370 |
|---|
| Protein GI | 107022043 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA ATATCGATGA TAGGCCCGTA GCGGCACTCG CCATAGTGCC TGAAAGTTGC
GCGTACAATC ATGGGCCTGA ACGCGCCGCT TGCGGCGCGG CTTCCCGTCT TCACCGCCAC
GCGTGCCCCG ATGCGCGCGG GCTCCCATTC CGGATACCCA TGTCCCACGT CGTCCGGCGC
CGGCCCGATG CCCGGCTGAT CCTGTTGCTC GGCGCGCTCG CGGCCTGCGG GCCGATCGCC
ACCGACATGT ACCTGCCGAG CCTGCCGTCG ATCGCCGCGG GCTTCTCCGT CAGCGCCGGC
GCCGCGCAGC GCACGCTGAC GAGCTTCATG GCCGGCTTCT CGATCGGCAT GCTGCTGTAC
GGCCCGCTGT CCGACACGTG GGGCCGCCGC CCCGTGCTGC TCGGCGGGAT CGCGCTGTTC
ACGCTCGCGA GTATCGGCTG CTTCGTGGCG GGTTCGATCG ACATGCTGAT CGTCGTGCGC
TTTTTGCAGG CGCTCGGCGC CGGCGCCGCG TCGGTGCTCG CGCGGGCGAT CGCGCGCGAC
GCGCACGAGC CGAGCGACGC GGCGAAGGTG CTGTCGATGG TCGCGATCGT TACCGCGGTC
GGGCCGCTGC TCGCGCCGCT GATCGGCGGC CAGATCCTGC GTTTCTCCGG CTGGCGCGGC
GTGTTCGTCG TGCTGGCCGT GTTCGGCGCG CTCTGCGCGA CGACCGCGTA CCTGCGCGTG
CCCGAAACCT GGCCGAAGGA GCGGCGCAAG AGCGCGGCCG TGCTCGCGTC GTTCGCGTCG
TACGGGCGCA TCCTGTCCGA CCCCGTCGCA TGGGGGCACA TGCTGTGCGG CGGGATGGCG
TTCGCATCGA TGTTCTCGTA CATCACCGCG ACGCCGTTCG TGTACATCGA GTATTTCCAC
GTGTCGCCGC AGCACTACGG GCTGCTGTTC GGCCTGAACG TCGTCGGGAT CATGATCGGC
AACTTCGCGA ACTCGCGGCT CGTCGGCCGC ATCGGTTCGC TGCGCATCAT CGCGGCCGCG
TCGCTCGTGA GCTGCATCGC GTCGCTCGCG GTCGCGTTCG TCGCGCTGAC CGGATTGGGC
GGGCTGTGGT CGATCGTCGT GTGCCTGTTC TTCGTCGTCG GCGTGGTCGG GATCCTGTCC
GCGAACTGCA CGACCGACCT GATGCATCGC TATCCGCACA ACGCGGGCGC GTCGGCGGCC
GTGTTCGGCG CGATGCAGCT CGCGCTCGGC GCGCTGGCGA GCGTCGCGAT CGGCGCACTC
GCGGACGGCA CGCCGTTCGC GATGGGCGTG ACGATCGGTG TGTCGGGCCT GCTGTGCTTC
GCCGGGCGCT ATCTGGTGCT GCGCTGGCAC GGCCGGCCGG TGAAAGCGGG CGCCTGA
|
|---|
| Protein sequence | MKVNIDDRPV AALAIVPESC AYNHGPERAA CGAASRLHRH ACPDARGLPF RIPMSHVVRR
RPDARLILLL GALAACGPIA TDMYLPSLPS IAAGFSVSAG AAQRTLTSFM AGFSIGMLLY
GPLSDTWGRR PVLLGGIALF TLASIGCFVA GSIDMLIVVR FLQALGAGAA SVLARAIARD
AHEPSDAAKV LSMVAIVTAV GPLLAPLIGG QILRFSGWRG VFVVLAVFGA LCATTAYLRV
PETWPKERRK SAAVLASFAS YGRILSDPVA WGHMLCGGMA FASMFSYITA TPFVYIEYFH
VSPQHYGLLF GLNVVGIMIG NFANSRLVGR IGSLRIIAAA SLVSCIASLA VAFVALTGLG
GLWSIVVCLF FVVGVVGILS ANCTTDLMHR YPHNAGASAA VFGAMQLALG ALASVAIGAL
ADGTPFAMGV TIGVSGLLCF AGRYLVLRWH GRPVKAGA
|
|---|
| |