| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0348 |
|---|
| Symbol | |
|---|
| ID | 4092844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 385647 |
|---|
| End bp | 387233 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638013607 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_620233 |
|---|
| Protein GI | 107021906 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
|---|
| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0658875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC CGATCCGCTT CTACCATCGT CACGCGATCC GCGAAGTCAG CGGCGCGGAC
GTGACCCGCA CCGTGCTGCA ATACCTGCGC GAGGACGCGC ATTGCACCGG CACCAAGGAA
GGCTGCGCGG AAGGCGACTG CGGCGCGTGC ACGGTCGTCG TCGGCGAGCT GACCGATGCC
GGCGCGGTCG AGTTCAAGGC CGTCAACGCA TGCATCCAGT TCCTGCCGAC GCTCGACGGC
AAGGCGCTCC TGACGGTCGA GGACCTGCGC CAGCCGGACG GCACGCTGCA TCCGGTGCAG
CAGGCGATGG TCGATTGCCA CGGTTCGCAA TGCGGGTTCT GCACGCCCGG CTTCGTGATG
TCGATGTGGG CGCTGTACGA GAAGCGCGGC CACGAAGGCT GCGGCAGTGC GTGCGCGAAG
GCGAAGGACG TGCCGACGCG CACCGAGATT GCCGATGCGC TGACCGGCAA CCTGTGTCGC
TGCACCGGCT ATCGCCCGAT CGTCGATGCG GCGGTGCGGA TGTTCGATGC GACCGGCGAA
GGCGCGACCG GCGAAGGTGC TCAGGCACCG TCGGCGCCGG TCGACACGGC CGCGCTCGCC
CGCACGCTTG CATCGCTCAA GCGCGACGAC ACGTTCGACT ACACGACGAT CGACGGCGCG
CGCTTCGCGG CGCCGCGCAC GCTCGACGCG CTGGCCGCGC TGAAGGCGGA GCGCCCCGAC
GCGCGCATCC TCGCCGGCAG CACCGACATC GGCCTGTGGG TCACCAAGCA GATGCGCCGC
CTCGACGACC TGATCTACGT CGGCCAGATC GCCGAACTGC AGCAGGTCGT GCACGGCGAC
GACTGGATCG AGATCGGCGC GGGCGTGACG GTCGAGAAGG CCTATGCGGC GCTGGCCGGC
ACGTATCCGG AGCTGACCGA GATGTGGAAG CGCTTCGCGT CGCTGCCGAT CCGCAATGCG
GGCACGCTCG GCGGCAACGT CGCGAACGGC TCGCCGATCG GCGATTCGAT GCCGGGCCTG
ATCGCGCTCG GCGCGCGCGT CGTGCTGCGC GGCGGCGACA CGGTGCGCGA GCTGCCGCTC
GAGGCGCTCT ATACGGGCTA CCAGCAGAAG GACATGGCGC CGCACGAATT CGTCGTCGGC
CTGAAGGTGC CGACCCGCAC CGGCGCGCGC GACAAGCTGC AGTTCCGCAC GTACAAGCTG
TCGAAGCGCT TCGACTCGGA CATCTCGGCC GTGTGTGCGG CGTTCGCGTT CATCGCGGAC
GGCGACACGA TCCGCGAGCC GCGCATCGCG TTCGGCGGAA TGGCCGCGAC GCCGAAGCGC
GCGGCCAATA CGGAAGCCGT GCTCGACGGC GCGCAGTGGC ACGAAGCCAC CGCGCAGGCC
GCGATGCAGG CGCTCGAGCG CGACTACCAG CCGTTGTCCG ACATGCGCGC GACGAGCACG
TATCGGCTCG ATACCGCGAA GAACCTGATG TATCGATTCT GGCTGGAGAC GCGTCCGCAC
GACCCGTTGC CGCCGCAAGC CTTGAATGTG CGCGAAGTGG CCGCCGAAGT CGCCGCTGAA
GCGGCCAACG ACGCGGCGCG CGTCTGA
|
|---|
| Protein sequence | MSEPIRFYHR HAIREVSGAD VTRTVLQYLR EDAHCTGTKE GCAEGDCGAC TVVVGELTDA
GAVEFKAVNA CIQFLPTLDG KALLTVEDLR QPDGTLHPVQ QAMVDCHGSQ CGFCTPGFVM
SMWALYEKRG HEGCGSACAK AKDVPTRTEI ADALTGNLCR CTGYRPIVDA AVRMFDATGE
GATGEGAQAP SAPVDTAALA RTLASLKRDD TFDYTTIDGA RFAAPRTLDA LAALKAERPD
ARILAGSTDI GLWVTKQMRR LDDLIYVGQI AELQQVVHGD DWIEIGAGVT VEKAYAALAG
TYPELTEMWK RFASLPIRNA GTLGGNVANG SPIGDSMPGL IALGARVVLR GGDTVRELPL
EALYTGYQQK DMAPHEFVVG LKVPTRTGAR DKLQFRTYKL SKRFDSDISA VCAAFAFIAD
GDTIREPRIA FGGMAATPKR AANTEAVLDG AQWHEATAQA AMQALERDYQ PLSDMRATST
YRLDTAKNLM YRFWLETRPH DPLPPQALNV REVAAEVAAE AANDAARV
|
|---|
| |