Gene Bcen_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0316 
Symbol 
ID4092342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp353464 
End bp353976 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID638013575 
ProductOmpA/MotB 
Protein accessionYP_620201 
Protein GI107021874 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00135962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCGA ATAAAGCTCG TCTGGCCCTG GCCGTGATGA TGATCAGCGC GCTCGCAGCG 
TGCAAGTCGG GCGTGAAGCT CGACGACAAG GCAAACAACG CGGGCGCAGT CAGCACGCAG 
CCGAGCGCCG ACAACGTCGC GCAAGTGAAC GTCGATCCGC TGAACGATCC GAACAGCCCG 
CTCGCGAAGC GCAGCATCTA CTTCGACTTC GACAGCTATT CGGTGAAGGA CGAGTACCAG 
CCGCTGATGC AGCAGCACGC GCAGTACCTG AAGAGCCACC CGCAGCGCCA CGTGCTGATC 
CAGGGCAACA CCGACGAACG CGGCACGAGC GAGTACAACC TCGCGCTGGG CCAGAAGCGT 
GCGGAAGCCG TCCGCCGTGC GATGGCACTG CTCGGCGTGA ACGATTCGCA AATGGAAGCC 
GTGAGCCTCG GCAAGGAAAA GCCGCAGGCA ACGGGTCACG ACGAAGCATC GTGGGCGCAG 
AACCGTCGCG CCGACCTCGT CTACCAACAG TAA
 
Protein sequence
MMSNKARLAL AVMMISALAA CKSGVKLDDK ANNAGAVSTQ PSADNVAQVN VDPLNDPNSP 
LAKRSIYFDF DSYSVKDEYQ PLMQQHAQYL KSHPQRHVLI QGNTDERGTS EYNLALGQKR 
AEAVRRAMAL LGVNDSQMEA VSLGKEKPQA TGHDEASWAQ NRRADLVYQQ