Gene Bcen_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0279 
Symbol 
ID4092227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp305533 
End bp306165 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID638013539 
ProductTetR family transcriptional regulator 
Protein accessionYP_620166 
Protein GI107021839 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGACA CAGGCACGCG ACTGACGCGC GACACGGTAT TGCGCGCGGC GCTGAACTTG 
CTGGACGAAG TGGGGATCGA CGGGCTGTCC ACGCGGCGGC TCGCCGAGCG GCTCGGCGTG 
CAATCGCCGA CGCTGTACTG GCATTTCAGG AACAAGGCCG AGCTACTCGA CGCGATGGCC 
GAGGCGATCA TGCTGGAGCG CCACGGTGAG TCGCTGCCCC GACCGGGCGA CGTGTGGGAT 
GTGTGGCTCG CCGAGAACGC GCGCAGTTTT CGCCGCGCGC TGCTCGCCTA TCGCGACGGC 
GCGCGCCTGC ACGCCGGCAC GCGACCGCGC GCGCTGCATT TCAGTTCGAT CGAACGCAAG 
GTCGCGCTGC TCGGTGAAGC GGGTTTCAAG CCGGACGAGG CGGTCGACGT GATGGTCGCG 
ATCGGGCGCT TCGTGGTCGG ATGGGTGCTG GAAGAGCAGG CGCGGCCGGA CGGCGACACC 
GATGCGCTGC TGCCGGATGC AGCCGAATAC CCGTTGTTCG CGCAAGGCTG GGCCGCGCTG 
CGCGAGCGCA GCGGCGACGA AGCGTTCGAG CGCGGTATCG CATGGATCGT CGACGGCGCG 
CGCGCGCGCC TTGCGGCGCG TCGGGCGGGC TGA
 
Protein sequence
MKDTGTRLTR DTVLRAALNL LDEVGIDGLS TRRLAERLGV QSPTLYWHFR NKAELLDAMA 
EAIMLERHGE SLPRPGDVWD VWLAENARSF RRALLAYRDG ARLHAGTRPR ALHFSSIERK 
VALLGEAGFK PDEAVDVMVA IGRFVVGWVL EEQARPDGDT DALLPDAAEY PLFAQGWAAL 
RERSGDEAFE RGIAWIVDGA RARLAARRAG