Gene Bcen_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0084 
SymbollpxC 
ID4091845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp87896 
End bp88813 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID638013344 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_619972 
Protein GI107021645 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00107254 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGC AGCGCACCAT CAAATCCATC GTGAAGACCG TGGGTATCGG TGTCCACTCG 
GGCCGCAAGA TCGAGTTGAC GCTCCGTCCC GCCGCGCCCG GCACGGGCAT CGTCTTTTCA 
CGCGTCGACC TGCCCACGCC GGTCGACATT CCCGCATCGG CGATGTCGAT CGGCGACACG 
CGGCTCGCGT CGGTGTTGCA GAAGGATGGC GTGCGCGTGT CGACGGTCGA GCACCTGATG 
TCCGCGTGTG CGGGGCTGGG CATCGACAAC CTGTACGTCG ATGTGACGGC CGAGGAAATC 
CCGATCATGG ACGGCAGCGC GGCCACGTTC GTGTTCCTGA TCCAGTCCGC CGGCATCGAG 
GAGCAGAACG CGCCGAAGCG CTTCATCAAG GTGACGAAGC CGGTCGAGAT CCGCGATGGC 
GACAAGTTCG CGCGTCTCGA TCCGTATTTC GGCTTCAAGC TGAAGTTCTC GATCGACTTC 
CGCCACCCGG CCGTCGACAA GACGGGCCAG GAGCTCGAGG TCGATTTCGC GACCACGTCG 
TACGTGCGCG AGATCGCGCG TGCGCGCACG TTCGGCTTCG CGCACGAGGC CGAGATGCTG 
CGCGAGATCG GCCTGGCGCG CGGCGGCAGC ATGGACAACG CGATCGTGCT CGACGAGTAC 
CGGATCCTGA ACAACGACGG GCTGCGCTAT GACGACGAGT TCGTAAAGCA CAAGATGCTC 
GACGCGATCG GCGACCTGTA CGTGATCGGC CACCCGCTGC TGGCGTCGTA CACCGCGTAC 
AAGTCGGGCC ACGGCCTGAA CAACGCGTTG CTGCGCGAAC TGCTCGCGCA CGAAGACGCG 
TACGAGATCG TGACGTTTGA CGATCCGCAG GCTGCACCGA AGGGGTTCGC GTTCGACGCG 
CAGACGGCCT TCGCGTGA
 
Protein sequence
MLKQRTIKSI VKTVGIGVHS GRKIELTLRP AAPGTGIVFS RVDLPTPVDI PASAMSIGDT 
RLASVLQKDG VRVSTVEHLM SACAGLGIDN LYVDVTAEEI PIMDGSAATF VFLIQSAGIE 
EQNAPKRFIK VTKPVEIRDG DKFARLDPYF GFKLKFSIDF RHPAVDKTGQ ELEVDFATTS 
YVREIARART FGFAHEAEML REIGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML 
DAIGDLYVIG HPLLASYTAY KSGHGLNNAL LRELLAHEDA YEIVTFDDPQ AAPKGFAFDA 
QTAFA