Gene Bcen_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0078 
SymbolmurC 
ID4091839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp81279 
End bp82676 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content69% 
IMG OID638013338 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_619966 
Protein GI107021639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA TCGTCAAACA CATTCATTTC GTCGGGATCG GCGGCGCGGG CATGAGCGGC 
ATCGCCGAAG TGCTCGTCAA CCTCGGCTAC GCGGTCAGCG GCTCGGACCT GTCGCGCAAT
GCGGTGACCG ATCGCCTCGA GGCGCTAGGC GCGCGGATCG CGATCGGCCA CGACGCGGCG
AACATCGAGG GCGCGAACGC GGTCGTCGTG TCGACGGCCG TGCGCTCGGA CAACCCGGAA
GTGCTGGCCG CGCGCCACCA GGGCGTGCCG ATCGTGCAGC GCGCGGTGAT GCTGGCGGAG
CTGATGCGCC TGAAGCAGGG CATCGCGATC GCCGGCACGC ACGGCAAGAC CACGACGACG
AGCCTCGTCG CGAGCGTGCT CGCCGCGGGC GGGCTGGACC CGACCTTCGT GATCGGCGGC
CGGCTGATCA GCGCCGGCGC GAACGCGCGG CTCGGCACGG GCGACTTCAT CGTCGCCGAG
GCCGACGAGT CGGATGCGTC GTTCCTGAAC CTGTACCCGG TGATCGAAGT CATCACGAAC
ATCGACGCCG ACCACATGGA CACCTACGGC CACGATTTCG CGCGGCTCAA GCAGGCGTTC
ATCGAATTCA CGCAGCGCCT GCCGTTCTAC GGCAGCGCGG TGGTGTGCGT CGACGATCCG
AACGTGCGGC AGATCATTCC GTTCATCTCG AAGCCGGTCG TGCGCTACGG CCTGTCGCCG
GACGCGCAGG TGCGCGCGGA AGACATCGAC GCGCGCGACG GCCGGATGCA CTTCACGGTG
ATCCGCGAAG GGCGTGCGCC GCTCGCGGTC GTGCTGAACA TGCCGGGCCT GCACAACGTG
CAGAACGCGC TCGCGGCGAT CGCGATCGCA ACCGATCTCG GCGTGTCGGA CGACGCGATC
CAGCTGGCGC TGGCGGAATT CAACGGCGTC GGCCGGCGCT TCCAGCGCTA CGGCGAGGTG
CCGAGCGCGG ACGGCGGCCA GTACACGCTG ATCGACGACT ACGGTCATCA CCCGGTCGAG
ATGGCGGCGA CGATCGCGGC CGCGCGCGGC GCGTTCCCGG GCCGTCGCCT CGTGCTGGCG
TTCCAGCCGC ACCGCTACAC GCGCACGCGC GACTGCTTCG ACGATTTCGT CAACGTGCTG
TCGACGGTCG ATGCGCTGGT GCTGACGGAA GTCTATGCGG CCGGCGAGGC CGCGATCCCG
ACGGCCAGCG GCGACGCGCT GTCGCGTGCG CTGCGCGCGG TGGGCAAGGT CGACCCGGTG
TTCGTCGCGA CGGTCGACGA CGTGCCGGAC GCATTGGCGA AGGTCGCGCA GAACGGCGAC
GTGGTGATCA CGATGGGGGC GGGTTCGATC GGCGGCGTGC CGGCGAAGCT CGTGCAACAC
ATTCAACAGA AGGCATGA
 
Protein sequence
MKHIVKHIHF VGIGGAGMSG IAEVLVNLGY AVSGSDLSRN AVTDRLEALG ARIAIGHDAA 
NIEGANAVVV STAVRSDNPE VLAARHQGVP IVQRAVMLAE LMRLKQGIAI AGTHGKTTTT
SLVASVLAAG GLDPTFVIGG RLISAGANAR LGTGDFIVAE ADESDASFLN LYPVIEVITN
IDADHMDTYG HDFARLKQAF IEFTQRLPFY GSAVVCVDDP NVRQIIPFIS KPVVRYGLSP
DAQVRAEDID ARDGRMHFTV IREGRAPLAV VLNMPGLHNV QNALAAIAIA TDLGVSDDAI
QLALAEFNGV GRRFQRYGEV PSADGGQYTL IDDYGHHPVE MAATIAAARG AFPGRRLVLA
FQPHRYTRTR DCFDDFVNVL STVDALVLTE VYAAGEAAIP TASGDALSRA LRAVGKVDPV
FVATVDDVPD ALAKVAQNGD VVITMGAGSI GGVPAKLVQH IQQKA