| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0073 |
|---|
| Symbol | |
|---|
| ID | 4091737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 74770 |
|---|
| End bp | 76176 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638013333 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_619961 |
|---|
| Protein GI | 107021634 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGC TCAGCCTCGG CGAAGCCGCC CGCCTGATTC CCGGCGCCAC CGTCCACGGC
GACGCGGGCG TCACGTTCAA CCGCGTGTCG ACCGATAGCC GCACGGTCGG CGCGGGCGAC
CTGTTCGTCG CGCTGAAGGG CGAGCGTTTC GATGCGCACG ACTTTCTCGG CGACGTTGCC
GCGCGCGGCG CTGCCGCGGC GCTCGTCGCG CACGCGCCGG CGGGCATTGC GATGCCGATG
ATCGAAGGCG GCGAAACGCG TGCCGCGCTC GGCGCGCTCG CGCACGGCTG GCGGATGCGA
TTCCCGCTGC CGCTCGTCGC GGTGACGGGC AGCAACGGCA AGACGACCGT CAAGGAAATG
ATCGCGTCGA TCTTCGCGGC GGCGGTCGGC GCCGACGCAC GGCTCGCGAC GGCCGGCAAC
CTGAACAACG ATGTCGGCCT GCCGCTGACG CTGCTGCGCC TGTCGGCCGC GCATCGTCTC
GCGGTGATCG AGATCGGCAT GAACCATCCG GGCGAAACCG AAGTCCTCGC GCGCCTCACC
GCGCCGACGG TCGCGCTCGT CAACAACGCG CAGCGCGAGC ACCAGGAATT CATGGCGACG
GTCGACGCCG TCGCGCTCGA ACATGCGGCC GTGATTCACG CGCTGCCGCC GGACGGCGTC
GCGGTGTTCC CGGCCGACGA CGCGTACGCG GGCATCTGGC GCGTCGCGGC GACCGGCAAC
CGCATCCTCG ATTTCGCGCT GCACGACGCC GAACGGCAGA ACGACGCACA GGTCGTCGGG
CGCATGCACG GCGGCGAACT CGCGATCGAC ACGCCGGCGG GCGCCGTCAC GGTGCGGCTG
CGCGCGCTCG GCGAGCACAA CGCGCGGAAC GCGCTGGCCG CGACGGCCGC GGCGCTCGGC
GCCGGCGTCG CGCTGTCGGC GATCCGGCAG GGTCTCGAAG CGTTCGAACC GGTCAAGGGC
CGGCTGCAGG TGAAGCAGGC GAGCGTCGGC AGCCTCGGGG GCGCGACGGT CGTCGACGAT
ACGTACAACG CGAATCCCGA TTCGATGCGT GCCGCGATCG ACGTGCTCGC CGCGCATCCG
GCGCCGCGCG TGCTGGTAAT CGGCGACATG GGCGAAGTCG GCGACGAAGG GCCGGCCTTC
CATCGCGAGA TCGGCGCGTA CGCGCGCGAA CGCGGGATCG ACGCGCTGTT CGCGCTCGGC
GACGCATCGC GCGACGCGTG CACGGCCTAC GGCGACACGG CACGCCATTT CGACGACGTC
GGCGCGCTCG TGTCGGCGCT GCTCGCGGCC GGTTACGGCG CGCAGGCAAC GGTGCTCGTG
AAGGGCTCGC GGTACATGAA GATGGAGCGC GTGGTCGACG CGCTGACGAA CCAACCCGCG
GCGGGCACCG TGCCTGCCGC ACACTGA
|
|---|
| Protein sequence | MTMLSLGEAA RLIPGATVHG DAGVTFNRVS TDSRTVGAGD LFVALKGERF DAHDFLGDVA
ARGAAAALVA HAPAGIAMPM IEGGETRAAL GALAHGWRMR FPLPLVAVTG SNGKTTVKEM
IASIFAAAVG ADARLATAGN LNNDVGLPLT LLRLSAAHRL AVIEIGMNHP GETEVLARLT
APTVALVNNA QREHQEFMAT VDAVALEHAA VIHALPPDGV AVFPADDAYA GIWRVAATGN
RILDFALHDA ERQNDAQVVG RMHGGELAID TPAGAVTVRL RALGEHNARN ALAATAAALG
AGVALSAIRQ GLEAFEPVKG RLQVKQASVG SLGGATVVDD TYNANPDSMR AAIDVLAAHP
APRVLVIGDM GEVGDEGPAF HREIGAYARE RGIDALFALG DASRDACTAY GDTARHFDDV
GALVSALLAA GYGAQATVLV KGSRYMKMER VVDALTNQPA AGTVPAAH
|
|---|
| |