Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0050 |
Symbol | |
ID | 4091920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 48794 |
End bp | 49270 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638013307 |
Product | alkylhydroperoxidase AhpD core |
Protein accession | YP_619939 |
Protein GI | 107021612 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.464213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCGA AACTCAATCC GTTTGCCGCC GCCCCCGCGC TGATGAAGAG CTGGATGACC GTGTCGGTCG CCGCGGCCGG GAGCCTCGAG CCGACGCTGA TCGAGCTGGT CAAGATCCGC GCGTCGCAGA TCAACGCGTG CGCGAACTGC CTTAACATGC ACACCGTCGA GGCGCGCGAG CAAGGCGAAA CCGAGCAGCG CATCTACCTG CTGTCCGCGT GGCGCGAAGC GCCCTGCTAC ACCGACCGCG AACGCGCGGC GCTCGGCTGG ACCGAGGCGC TCACGCGGCT GTCGGAGGGC CATGCGGCGC ACGAAGCGGC CTACGCGGCG CTGAACGACC ATTTCAGCGA GGAAGAACAG GTGAAACTCA CGGTAATGAT CAACGTGATC AACGGCTGGA ACCGGCTCGC CGTCGGCTTC GGGCTGTGGG TCGACCCGGC CGACGCGAAG GCCGCCGCCG CGAAGATGGT GGCTTGA
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Protein sequence | MTAKLNPFAA APALMKSWMT VSVAAAGSLE PTLIELVKIR ASQINACANC LNMHTVEARE QGETEQRIYL LSAWREAPCY TDRERAALGW TEALTRLSEG HAAHEAAYAA LNDHFSEEEQ VKLTVMINVI NGWNRLAVGF GLWVDPADAK AAAAKMVA
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