Gene Bcen_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0050 
Symbol 
ID4091920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp48794 
End bp49270 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID638013307 
Productalkylhydroperoxidase AhpD core 
Protein accessionYP_619939 
Protein GI107021612 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.464213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGA AACTCAATCC GTTTGCCGCC GCCCCCGCGC TGATGAAGAG CTGGATGACC 
GTGTCGGTCG CCGCGGCCGG GAGCCTCGAG CCGACGCTGA TCGAGCTGGT CAAGATCCGC
GCGTCGCAGA TCAACGCGTG CGCGAACTGC CTTAACATGC ACACCGTCGA GGCGCGCGAG
CAAGGCGAAA CCGAGCAGCG CATCTACCTG CTGTCCGCGT GGCGCGAAGC GCCCTGCTAC
ACCGACCGCG AACGCGCGGC GCTCGGCTGG ACCGAGGCGC TCACGCGGCT GTCGGAGGGC
CATGCGGCGC ACGAAGCGGC CTACGCGGCG CTGAACGACC ATTTCAGCGA GGAAGAACAG
GTGAAACTCA CGGTAATGAT CAACGTGATC AACGGCTGGA ACCGGCTCGC CGTCGGCTTC
GGGCTGTGGG TCGACCCGGC CGACGCGAAG GCCGCCGCCG CGAAGATGGT GGCTTGA
 
Protein sequence
MTAKLNPFAA APALMKSWMT VSVAAAGSLE PTLIELVKIR ASQINACANC LNMHTVEARE 
QGETEQRIYL LSAWREAPCY TDRERAALGW TEALTRLSEG HAAHEAAYAA LNDHFSEEEQ
VKLTVMINVI NGWNRLAVGF GLWVDPADAK AAAAKMVA