| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0048 |
|---|
| Symbol | |
|---|
| ID | 4091918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 46987 |
|---|
| End bp | 48213 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638013305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_619937 |
|---|
| Protein GI | 107021610 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCC TTGCATCCCA GCTTCAGCGC CGTTACCAGG ACGTGCGCGC CCATAGCATC
GCGTTGACCG CGACGCTGTC CGCCGAAGAC CAGGCCGTGC AGTCGATGCC CGACGCGAGT
CCGACCAAAT GGCATCTCGC GCATACGACC TGGTTCTTCG AAACCGTCGT GCTGATGCGC
CGCGTGCCGG GCTACGCGCC GTTCGGCGCC GCGTTCCAGT TCCTCTTTAA TTCCTATTAC
GAAGCGCTCG GCCCGCGCCA TCCGCGGCCG CAGCGCGGGC TGCTCACGCG TCCGTCGCTC
GACGAGGTGC ATGCGTACCG GCAGTACGTC GACGACGCGA TGCTGCGCGC GCTGGCCGGC
GCCGACGCGG CACTGCTCGA CGCGATCGCG CCCGAGCTCG TGCTCGGCCT GCATCACGAG
CAGCAGCACC AGGAGCTGAT CGTCACCGAC ATGCTGCATG CGTTCTCGTG CAACCCGCTG
CGGCCGGCAT TCCGGCCGCG CACCGGCGAC GAAGCCGGAT GCGCGCTCGC CGCGGGCGAC
GCCGGCCCGT TGCGCTGGCT GCCGCAGCCG GGCGGGCTCG TCGAGATCGG CCACGATGGC
GATGCGTTTT CGTTCGACAA CGAACGGCCC CGTCACACCG CGCTCGTGCG GCCGTACGAG
ATCGCGAACC GCCTGGTGAC GAACGCGGAA TTCGCGGCGT TCATCGCCGA CGGCGGCTAT
ACGCGGCCCG AGTTCTGGCT GTCCGACGGC TGGGCCACGG TGCAGCGGGA AGGGTGGCAA
GGGCCCGCGT ACTGGATGCC GGACGACGAC GATGCGGCCG CCACGCGCGT GCGACGCACG
TTCGGCCTGC ATGGCGTCGA GCCGCTCGCG CCCGACGCGC CGGTGTGCCA CGTGAGCTTC
TACGAAGCGG CCGCGTACGC GGAATGGGCC GGCGCGCGGC TGCCGACCGA ATTCGAATGG
GAAACCGCGT TCGCGGCCGA CGGCATCCGC CAGATGCTGG GGCACGTGTG GCAGTGGACG
CGTTCGTCCT ACGAGCCGTA TCCGGGCTTT CGGCCACTCG CCGGGGTAGC GGCCGAATAC
AACGGCAAGT TCATGGTCGG CCAGCAGGTC CTGCGCGGCA GCAGCATCGC GACGCCGCCC
GGACACGAAC GGCCGACGTA CCGCAATTTC TTTCCGCCGG CGGCACGCTG GCAATTCACG
GGAGTGCGAC TTGCGCGAGA CGTCTGA
|
|---|
| Protein sequence | MSLLASQLQR RYQDVRAHSI ALTATLSAED QAVQSMPDAS PTKWHLAHTT WFFETVVLMR
RVPGYAPFGA AFQFLFNSYY EALGPRHPRP QRGLLTRPSL DEVHAYRQYV DDAMLRALAG
ADAALLDAIA PELVLGLHHE QQHQELIVTD MLHAFSCNPL RPAFRPRTGD EAGCALAAGD
AGPLRWLPQP GGLVEIGHDG DAFSFDNERP RHTALVRPYE IANRLVTNAE FAAFIADGGY
TRPEFWLSDG WATVQREGWQ GPAYWMPDDD DAAATRVRRT FGLHGVEPLA PDAPVCHVSF
YEAAAYAEWA GARLPTEFEW ETAFAADGIR QMLGHVWQWT RSSYEPYPGF RPLAGVAAEY
NGKFMVGQQV LRGSSIATPP GHERPTYRNF FPPAARWQFT GVRLARDV
|
|---|
| |