| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0015 |
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| Symbol | |
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| ID | 4091885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 15490 |
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| End bp | 16158 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638013272 |
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| Product | putative general secretion pathway protein J |
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| Protein accession | YP_619904 |
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| Protein GI | 107021577 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.293753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGACGCC CGTCCGCCCT CTCGTCCCGC GCTGCCCGCG GCTTCACGCT GATCGAGCTG
ATGATCGCGA TCGCGATCAT CGCGGTGGTG GCGATCCTCG CGTGGCGCGG GCTCGACCAG
ATCATGCGCG GTCGCGACAA GGTCGCCGCC GCGATGGAGG ACGAGCGCGT GTTCGCGCAG
ATGTTCGACC AGATGCGCAT CGACGCGCGG CTCGCCGCGA CCGACGACGA GGCCGGCCAG
CCGGCGATCG GCGTCGCCGG CAATACGCTG CAGATCGTGC GCGAACTCGA CGTGCCGGGC
GTCGCGCCGC GGCTGCAGGT GGTCCGCTAC CGGATCGCCG GCGGGCGCGT CGTGCGCTAC
GCATCGCCGC CGATCGACGA CACGAACCGG CTGCGCACCG TGCTGAAGGA CAGCAGCGTC
GAAGGCTGGA GCTGGGTCGC GCTGATGGGC GGCGTCGGCG CGATCGACGC GAAGCTGTAC
GTGCCGCGCG TGGGCTGGAC CACCAACCTG CAGACGGCCG ACGACGCGCT CGCGCAGAAC
AACGATGCGC TGAAGGTGCC GCAGATCGGC AACGCGCCGC CGGCGCGCGC GGTGACCGGG
CTGCAGGTCA GCATCGGCGC GACGTCGCTG CGCGTGCCGA TCACGCGCAT CTTCCTCGTC
GGGGAATGA
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| Protein sequence | MRRPSALSSR AARGFTLIEL MIAIAIIAVV AILAWRGLDQ IMRGRDKVAA AMEDERVFAQ
MFDQMRIDAR LAATDDEAGQ PAIGVAGNTL QIVRELDVPG VAPRLQVVRY RIAGGRVVRY
ASPPIDDTNR LRTVLKDSSV EGWSWVALMG GVGAIDAKLY VPRVGWTTNL QTADDALAQN
NDALKVPQIG NAPPARAVTG LQVSIGATSL RVPITRIFLV GE
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