| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3115 |
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| Symbol | |
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| ID | 4082702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3264792 |
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| End bp | 3265931 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638011501 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_618152 |
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| Protein GI | 103488591 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCG ATGAAACGGC GGCTGCCGAC ATCGACGCGC TGGAAACATA TGGCGCGAAA
CGCCGGAAGC TGCTCCGCAT CCTTGCGCTC GTCGTGCTGG CCGCCGCGAT CCTGTGGGGC
GCCTGGTATT TTCTGACGCA GGCGGGGCGC GTTCACACCG ACAACGCCTA TGTCGGCGCC
GATTCGGCGC AGGTGACCGC GCTCGTTTCG GGTCCGGTGA AGGACGTGCG CGTCAGCGGG
ACGCAGGCGG TGAAGCGGGG CGACATTCTG GTCATCCTCG ACGATGCCGA CCAGCGCATC
GCGCTTGCCG ACGCCGAGGC GGCGCTGCGC CTTGCGCGCC AGCGTTACGG GCAGGCCGAT
GCGAATGCCG ATGCGGCGCG CGCGCGTGTT GCCGCCCGCG GCGCCGATGT CGCGCAGGCG
CGCGCCCGGC TGCGCGATGC CGAGGCGAGC GTCGAACGCG CGCGCGCCGA ACTGGCGCGG
CGCGAGAGCA TCGCAGGCAC CGGCGCGGTG TCGGCCGAGG AGCTGACCGC GGCGCGTGCA
GCGGTCAAGC AGGCGCACGC CGCGCGCGAC CTTGCCGCCG CGGCGATCGC CGCGGCCGAG
GCAACGCGCG GATCGGCAAG CGGCGACCTT GGCGCCGCCG AGGCGGTGGT GCGCGGGACG
ACGGTGGACA CTGCCCCTGA AGTGGCGGCG GCGGCGGCGC GCGTCGAAAA GGCGCGGCTC
GATCTCGCGC GCACGGTGAT CCGCGCGCCG GTCGATGGCA TTGTCACCAA CCGGCAGGTG
CAGGTCGGCC AGCGGATCGC CGCGGGCGCG CCGATCATGG TGATCGTTCC CATCGCGACC
GCCTATGTCG ATGCCAATTT CAAGGAAAGC CAGTTCGAGG ATATCCGCAT CGGCCAGCCG
GTCGAACTGA CCTCGGACTA TTATGGCGGC GATGTCGTCT ATCGCGGCAA GGTGGTCGGC
ATCGCCGGCG GCACCGGCGC GGCCTTTTCG CTGATCCCCG CGCAGAATGC GACGGGCAAC
TGGGTGAAGG TCGTCCAGCG GCTGCCGGTG CGCATCGCGC TCGATCCGAA GCAGCTGAAA
GAACATCCGC TGCGCGTCGG GCTGTCGATG GAAGCGACGA TCGACACGCG CGGCAACTGA
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| Protein sequence | MMADETAAAD IDALETYGAK RRKLLRILAL VVLAAAILWG AWYFLTQAGR VHTDNAYVGA
DSAQVTALVS GPVKDVRVSG TQAVKRGDIL VILDDADQRI ALADAEAALR LARQRYGQAD
ANADAARARV AARGADVAQA RARLRDAEAS VERARAELAR RESIAGTGAV SAEELTAARA
AVKQAHAARD LAAAAIAAAE ATRGSASGDL GAAEAVVRGT TVDTAPEVAA AAARVEKARL
DLARTVIRAP VDGIVTNRQV QVGQRIAAGA PIMVIVPIAT AYVDANFKES QFEDIRIGQP
VELTSDYYGG DVVYRGKVVG IAGGTGAAFS LIPAQNATGN WVKVVQRLPV RIALDPKQLK
EHPLRVGLSM EATIDTRGN
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