Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3093 |
Symbol | |
ID | 4082829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3243206 |
End bp | 3244459 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638011479 |
Product | Na+ dependent nucleoside transporter-like protein |
Protein accession | YP_618130 |
Protein GI | 103488569 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.687878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGCC TGATCGGTCT GGCCGGCATC GCCGCATTGC TCATGATTGC CGTGCTTTTT TCATCGAACC GGCGGTGGAT CCGCCTGCGC GTCGTCATCC CCGCCTTCCT GCTCCAGGCC GGCTTCGCGG TGCTCGTCAT TGCGACGCCG TGGGGCCGCG CGGGGATCCA GGCAATGTCG AACGGCGTTT CCAACCTGCT CGGCTATGCC AAGGCGGGCA CCGACTTCAT TTTCGGTCCG CTGGCGTCGC CCGAAATGGG CGCGAACAGC TTTGCCATCG CCGCCTTGCC GGTGATCGTC TTTTTCGCCT CGCTCATCTC GATCCTCTAT TATCTCGGCA TCATGCAGCT GGTGATCAAA TGGGTCGGCG GCGCGATCCA GAAGGTCACG GGCATCACCA AGGTCGAAAG CCTCGGCGCC GCGGCGAACA TCTTTGTCGG CCAGTCCGAA TCGCCGCTCG TCATCCGCCC CTATCTCGCA GGCCTTACCC CCTCACAGCT TTTCACCGTG ATGACGGTCG GCATGGCGGG GGTCGCGGGC ACCATCCTGG GCGCCTATGC GAGCATGATC GGCGAGCAGC TCCTGCCCTA TCTGCTCGCC GCGAGCTTCA TGTCGGCACC GGGGGGCATC CTGATGGCCA AGATCATGAT GCCCGACGAT CCCAGGGATC TGGGCATCGA ACCCGTTATC ATGCCCGAGG CCAGCCATGA CGAGGAAAAG CCCGCCAACA TCATCATGGC CGCCGCGCAG GGCGCGCAAA CGGGGGTCAA GCTGGCGGTC GCGGTCGGCG CGATGGTGCT CGCCTTCGTC GCGCTCGTCG CGCTGGCGAA TGGCCTGCTC GCCGGAATGG GCGGCTGGTT CGGCTATCCC GACCTGTCGT TTCAGGCCGT TATCGGCGCG ATCTTCCGTC CCGTGATGTG GCTTATGGGC GTACCCTGGG ACGAAAGCGC CGTTGTCGGT GGCCTGTTCG GCAGCAAGGT CGTGCTCAAC GAGTTCGTCG CCTTCATCGA CCTCGGCAAG GTGCAGGGCG ATCTGTCGAT GACCGGGGTT GCAATCGCGA CCTTTGCGCT CTGCGGTTTC GCCAATTTCA GCTCGATCGC GATCCAGATG GCGGTGACCG GCGGCCTCGC CCCCAACCAG CGCCCGATGA TCGCACGGCT GGGATTGAAG GCGCTGCTGG CCGGCAGCCT GTCGAACCTC ATGTCGGCCG CGCTTGCCGG GCTGATGATC GCGCTGGTTC CGCCGATCGG ATAA
|
Protein sequence | MERLIGLAGI AALLMIAVLF SSNRRWIRLR VVIPAFLLQA GFAVLVIATP WGRAGIQAMS NGVSNLLGYA KAGTDFIFGP LASPEMGANS FAIAALPVIV FFASLISILY YLGIMQLVIK WVGGAIQKVT GITKVESLGA AANIFVGQSE SPLVIRPYLA GLTPSQLFTV MTVGMAGVAG TILGAYASMI GEQLLPYLLA ASFMSAPGGI LMAKIMMPDD PRDLGIEPVI MPEASHDEEK PANIIMAAAQ GAQTGVKLAV AVGAMVLAFV ALVALANGLL AGMGGWFGYP DLSFQAVIGA IFRPVMWLMG VPWDESAVVG GLFGSKVVLN EFVAFIDLGK VQGDLSMTGV AIATFALCGF ANFSSIAIQM AVTGGLAPNQ RPMIARLGLK ALLAGSLSNL MSAALAGLMI ALVPPIG
|
| |