| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3035 |
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| Symbol | |
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| ID | 4083043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3182005 |
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| End bp | 3182760 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011421 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_618072 |
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| Protein GI | 103488511 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.810122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT CATTCGATCT CGTCGGGCGC GTCGCGCTCG TGACCGGCGC CAACACGGGC
ATCGGGCAGG GGATCGCGTT CGCGCTTGCC GATGCGGGCG CCGATATCGC CGCCGCGGGC
CGCTCGCCCG CCGACGAGAC CGTCGGCATG ATACGCGGGC TCGGTCGCAA GGCCGACAAT
TTCGCCGCCG ACCTGTCGAG CGTCGCGGCG GTGCAGCCGC TCGTCGACAC CGTGCTCGCG
GAGTTCGGCC GCATCGACAT CCTCGTCAAC AACGCCGGCA TCATCCGCCG GGCCGATGCG
CTCGATTTCA CCGAGGAAGA TTGGGATGCG GTAATGGACA CCAATCTCAA GACGCTCTTC
TTCCTCTGCC AGAGCGTCGG ACGGCACATG ATCGCGCGCG GGTCGGGCAA GATTATCAAC
ATCGCCTCGA TGCTGACCTT TCAGGGGGGC GTCCGCGTGC CCAGCTACAC CGCGTCGAAA
TCGGGGGTCG GCGGGCTCAC CAAGCTGCTC GCGAACGAAT GGGCGGCGAA GGGGGTCAAC
GTCAACGCGA TCGCGCCCGG CTATATCGCG ACGAACAACA CCGCCGCGCT GCAGGCCGAT
GAGACGCGCA GCCGGCAGAT CATGGAGCGC ATCCCGGCGG GCCGCTGGGG CGACCCCGCC
GACATCGGCG GCGCGGCGGT ATTCCTGGCG TCGCGCGCGT CGGATTATGT GCAGGGGCAT
ATCCTCGCCG TCGACGGCGG CTGGCTGGCG CGATAA
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| Protein sequence | MTASFDLVGR VALVTGANTG IGQGIAFALA DAGADIAAAG RSPADETVGM IRGLGRKADN
FAADLSSVAA VQPLVDTVLA EFGRIDILVN NAGIIRRADA LDFTEEDWDA VMDTNLKTLF
FLCQSVGRHM IARGSGKIIN IASMLTFQGG VRVPSYTASK SGVGGLTKLL ANEWAAKGVN
VNAIAPGYIA TNNTAALQAD ETRSRQIMER IPAGRWGDPA DIGGAAVFLA SRASDYVQGH
ILAVDGGWLA R
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