Gene Sala_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3019 
Symbol 
ID4082851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3163358 
End bp3163906 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content73% 
IMG OID638011406 
Producthypothetical protein 
Protein accessionYP_618057 
Protein GI103488496 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCCTCCTCTC CGCCCTCGCC GCCGCCTCGC TGACCATCGG CGGCTGCGGC 
CTGCGCCCCC TCTATGCCAA TGGCAGCGGC GGCGCGGTGG CACAGGTGCT CGCCGACGTC
GATGTCGCGC CGATCGCGGG CCATGAGGGC TGGCTTGTCC GCAACGCGCT GCGCGACCGG
TTGCAGGCGA CGCAGGGCGG CGACGGCGCG GGCAAGCGGC TGCGCCTCGA TGTGCGGCTC
GAGGATTCGA TCACCGGCTT TGGCGTGCGC GCCGACGATG CCGTGACGCG CGAGCGGCGC
ACGTTACGCG CGCGCTATCA GCTCATCGAG GCCGCGACGG GCGAGGTGCT GCTCGACGCG
ACCGCCGCGC AGGACGCGGG CATCGACGTC GTCGGCAGCG AATATGCGAC GATCGCCGCC
GAATCGACCG CGCTCGAACG GCTCGCTTCG GGGATCGCCG ACCAGATCGT CTCGCGGCTT
GCCGTCTATG CGAACCGCGG CGGCGGTCAG GGTGCCGCCA CCCCCACTCC CAGCCCCGCC
GGGCAATGA
 
Protein sequence
MRTLLLSALA AASLTIGGCG LRPLYANGSG GAVAQVLADV DVAPIAGHEG WLVRNALRDR 
LQATQGGDGA GKRLRLDVRL EDSITGFGVR ADDAVTRERR TLRARYQLIE AATGEVLLDA
TAAQDAGIDV VGSEYATIAA ESTALERLAS GIADQIVSRL AVYANRGGGQ GAATPTPSPA
GQ