| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2977 |
|---|
| Symbol | |
|---|
| ID | 4083060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3121640 |
|---|
| End bp | 3122323 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638011362 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_618015 |
|---|
| Protein GI | 103488454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0331949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGATG CGGCATGGCC GGTGCGCATC GTCCGCCACG CGCAGTCGCG CCGCTATCGC
CTGATTTTCG ATGGTGCGCG CGGCGAACTG CGGCTCACCG TGCCGCGCCG CGCGAGCGAA
CGCGCGGCGA TCAAATGGGC CGCCGAGCAG CAGGCGTGGC TCGCCGAACA GATCGGCAAG
GCGGTCAGGC CGGTGATGGT CGGCCCCGGC GCCGTCATCC CCTTTCGCGG CATCGAGCGG
CGCATCGACT GGTCGCCGGG CGCGCCGCGC ACCATCCGGC TGGGCAGCGA TACGCTCGGC
GTCGGCGGCC CGGTCGAGAG CGTCGGCCGC CGCATCGAGC GCTGGCTGAA GGCCGAGGCG
CTCACGCTCA TGGAAAGCGA GAGCCGCGCA ATTGCGGGCG CGGCGGGACT GGCCGTCGGC
CGCGTCGGCG TCGGCGACCC GCGCAGCCGC TGGGGCAGTT GCACCCACGA TGGCGACCTG
CGCTACAGCT GGCGGCTGAT CATGGCGCCC GACCATGTCC GCCGCGCGAC CGTGGCGCAC
GAGGTCGCGC ATCTTCGCCA TATGGATCAC AGCCCGGTCT TTCATGCGCT CGTCGCCACG
CTGCACGACG GCGACGTCGC CGCGGCGCGC GGCTGGCTGC GGCGCGAAGG GCGCGCGCTG
CACCGTTATC GCTTTACCGC CTGA
|
|---|
| Protein sequence | MGDAAWPVRI VRHAQSRRYR LIFDGARGEL RLTVPRRASE RAAIKWAAEQ QAWLAEQIGK
AVRPVMVGPG AVIPFRGIER RIDWSPGAPR TIRLGSDTLG VGGPVESVGR RIERWLKAEA
LTLMESESRA IAGAAGLAVG RVGVGDPRSR WGSCTHDGDL RYSWRLIMAP DHVRRATVAH
EVAHLRHMDH SPVFHALVAT LHDGDVAAAR GWLRREGRAL HRYRFTA
|
|---|
| |