Gene Sala_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2975 
Symbol 
ID4083058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3118996 
End bp3119403 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID638011360 
Productprotein-methionine-S-oxide reductase 
Protein accessionYP_618013 
Protein GI103488452 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0725689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CGAAAACCGA CAAGCCGCTC GACCCCATGG CCCATCATGT GCTGCGCGAG 
GGCGGCACCG AACGCGCCTT CACCGGCAAA TATACCGACC ATAAGGGCGA TGGCATCTAT
CGCTGCGCGG GTTGCGGCGC GCCGCTGTTC GACAGCCGCA CCAAATATGA CAGCGGGTCG
GGCTGGCCAA GCTATACGGC GCCTGCAAAC GAAGCGGCGG TGACCGAACA TCGCGACGCG
AGCCACGGGA TGATCCGCAC CGAAGTGCGC TGCGCGACGT GCGAGGGCCA CCTCGGCCAT
GTGTTCCCCG ACGGCCCCGG ACCGACCGGC CTGCGCTATT GCATCAACAG CGCGGCGCTT
GACTTCGCCG ACCGCGCGCC GGATGAGGCG TCAACCGGCG AGGGCTGA
 
Protein sequence
MTDPKTDKPL DPMAHHVLRE GGTERAFTGK YTDHKGDGIY RCAGCGAPLF DSRTKYDSGS 
GWPSYTAPAN EAAVTEHRDA SHGMIRTEVR CATCEGHLGH VFPDGPGPTG LRYCINSAAL
DFADRAPDEA STGEG