Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2975 |
Symbol | |
ID | 4083058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3118996 |
End bp | 3119403 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011360 |
Product | protein-methionine-S-oxide reductase |
Protein accession | YP_618013 |
Protein GI | 103488452 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0725689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC CGAAAACCGA CAAGCCGCTC GACCCCATGG CCCATCATGT GCTGCGCGAG GGCGGCACCG AACGCGCCTT CACCGGCAAA TATACCGACC ATAAGGGCGA TGGCATCTAT CGCTGCGCGG GTTGCGGCGC GCCGCTGTTC GACAGCCGCA CCAAATATGA CAGCGGGTCG GGCTGGCCAA GCTATACGGC GCCTGCAAAC GAAGCGGCGG TGACCGAACA TCGCGACGCG AGCCACGGGA TGATCCGCAC CGAAGTGCGC TGCGCGACGT GCGAGGGCCA CCTCGGCCAT GTGTTCCCCG ACGGCCCCGG ACCGACCGGC CTGCGCTATT GCATCAACAG CGCGGCGCTT GACTTCGCCG ACCGCGCGCC GGATGAGGCG TCAACCGGCG AGGGCTGA
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Protein sequence | MTDPKTDKPL DPMAHHVLRE GGTERAFTGK YTDHKGDGIY RCAGCGAPLF DSRTKYDSGS GWPSYTAPAN EAAVTEHRDA SHGMIRTEVR CATCEGHLGH VFPDGPGPTG LRYCINSAAL DFADRAPDEA STGEG
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