Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2959 |
Symbol | |
ID | 4081075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3101837 |
End bp | 3102766 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638011344 |
Product | hypothetical protein |
Protein accession | YP_617997 |
Protein GI | 103488436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00883082 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0672974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATC GCATTTTCAT TCCGGCCCTC GCGCTCGCCG CGTCGGCCAT GGCTTTTTCG GCGCCGGCCG CGGCGCAGCT GCTTGGCGGC AGCGGCGGAC TGGGCGGCGG GCTTGGCGGA ACGCTGGGCG GCACGCTCGG CAATCCGACC GGGCCGATCG GTGGCACGCT CGGCACGGCG GGCGAACTTG CGGGTTCGGG CCGCGGCGAG GCCAAGGTCG ACCGCCGTTC GGGCCGCGTC GAAGGCCGCG GCGGCGCCGA CGCGCGCGGC AGCGGCTCGG CCGATGCCGG CGGCAATCTG CTCGGCAGCA CGCTGGGCGG CAACGCTCAG GGTTCGGGCG GGGCCTCGGC CGACGGCAGC GTCGGCGCGC AGGCGGTCGG CACCGATTTC GCGCGTGACA CGGTCGGCGG CGCCCTCGGC ACCGCGCGCG GCGCCGCCGC CACCGCCACC GGGACCGCGC AAGGCGCGGC CGGGGCTGTC CGCGACCGGG CGGGCGGCGC GCTGTCGAAC GTCTCAGGCA GCGCCAGCGC CGCCGGTTCG GCCGCGGGCA GTTTTCAGGG CAGCCTCGGC CAGCTCGCGG CGGCCGGCAG CGGCGCGGCC AGCGGCAGCG GCATGTTCGC TGTCATGCCG GGAATGCCCG TCACCGACCC GCGCGGCAAG GTGATCGGCT ATGTCCATGA CGTGCGGCAG ACGGGCCGCG GCGTCGTCGA GGCGGTGACG GTCGAGGTCG GCAACCGCGT CGCGACGCTT CCGGCCGCCA GCTTTGCCGG ATCGGGCGAT GTGCTCGTCA GCGGCATGAC CAAGGGCCAG CTCAAGGACG CCGCAAAGGC GCAGGAGCGG GCGGCCGAAG AGGATGGCAG CGCGCCGCCC GCCCGGTCGA CGTCGTCGCG GGGCAACCGC GCCGAACGCG GCCACACCCG CGCCGACTGA
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Protein sequence | MANRIFIPAL ALAASAMAFS APAAAQLLGG SGGLGGGLGG TLGGTLGNPT GPIGGTLGTA GELAGSGRGE AKVDRRSGRV EGRGGADARG SGSADAGGNL LGSTLGGNAQ GSGGASADGS VGAQAVGTDF ARDTVGGALG TARGAAATAT GTAQGAAGAV RDRAGGALSN VSGSASAAGS AAGSFQGSLG QLAAAGSGAA SGSGMFAVMP GMPVTDPRGK VIGYVHDVRQ TGRGVVEAVT VEVGNRVATL PAASFAGSGD VLVSGMTKGQ LKDAAKAQER AAEEDGSAPP ARSTSSRGNR AERGHTRAD
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